Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR7-3-201ENST00000384898 110 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 MIR153-1-201ENST00000384914 90 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 RPL23AP95-201ENST00000426806 265 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 AC010095.1-201ENST00000443543 144 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 AC016925.1-201ENST00000458303 298 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 Y_RNA.637-201ENST00000459424 114 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-659P-201ENST00000516454 104 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 AC022616.8-201ENST00000533569 253 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 CYCSP26-201ENST00000534107 320 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 SNORD84-203ENST00000584275 78 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 AL138963.2-201ENST00000605137 226 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 AL359693.1-201ENST00000614959 2407 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.03□□□□□ -1.77
SHKBP1Q8TBC3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AC090971.4-201ENST00000560291 1800 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 RNU6-173P-201ENST00000364215 104 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 RNU6-898P-201ENST00000365627 104 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 RNU6-429P-201ENST00000384582 108 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 SNORA11.1-201ENST00000408133 129 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 Y_RNA.595-201ENST00000410403 105 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 RNA5SP31-201ENST00000411144 127 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 RNU6-1199P-201ENST00000411249 104 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AL035423.1-201ENST00000420331 213 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 CYP4F29P-201ENST00000420685 446 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AC007919.1-201ENST00000429380 217 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 HMGB1P37-201ENST00000439613 609 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 RPL23AP58-201ENST00000440453 469 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 RPS20P10-201ENST00000451209 253 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AC022695.1-201ENST00000522089 237 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 DEFB117-201ENST00000602356 141 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AL670379.2-201ENST00000604983 252 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 Y_RNA.802-201ENST00000614892 130 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AL773545.4-201ENST00000637262 310 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AL513478.4-201ENST00000641636 310 ntBASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
SHKBP1Q8TBC3 AC008568.2-201ENST00000623862 2313 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 RNU6-142P-201ENST00000384019 107 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 MIR199A2-201ENST00000385289 110 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 U3.37-201ENST00000408528 213 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AC138623.1-201ENST00000418060 216 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 NDUFB4P7-201ENST00000423198 363 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AL358075.3-201ENST00000426289 226 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AC107027.2-201ENST00000512197 115 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 MIR2114-201ENST00000516645 80 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 RNU6-1198P-201ENST00000516904 67 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AC244505.7-201ENST00000599675 272 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AL391261.4-201ENST00000616012 481 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 TUG1_4.1-201ENST00000619464 181 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AC012314.7-201ENST00000619693 93 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 AL365440.1-201ENST00000436135 2167 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHKBP1Q8TBC3 SRP72P2-201ENST00000344851 1979 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHKBP1Q8TBC3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHKBP1Q8TBC3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SHKBP1Q8TBC3 Y_RNA.172-201ENST00000363765 102 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 RNU6-578P-201ENST00000390980 103 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 RNU2-68P-201ENST00000410878 191 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 AL138785.1-201ENST00000425821 331 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 HMGN2P31-201ENST00000432430 273 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 AL356535.1-201ENST00000440335 398 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4□□□□□ -1.77
SHKBP1Q8TBC3 AL121594.1-201ENST00000475906 575 ntBASIC4□□□□□ -1.77
SHKBP1Q8TBC3 AC104619.4-201ENST00000510773 249 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms