Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SNORA8-201ENST00000384574 139 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 RNU4-46P-201ENST00000410818 138 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 RN7SKP142-201ENST00000411236 328 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 PRELID3BP1-201ENST00000457142 540 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 RNU1-98P-201ENST00000458992 160 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 MTCO3P7-201ENST00000510008 774 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AC009646.1-201ENST00000510455 318 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 RNU5F-2P-201ENST00000516066 82 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 SNORA25.17-201ENST00000517184 124 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AC023050.3-201ENST00000541142 333 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 GNAI2P1-201ENST00000541815 315 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 MIR4528-201ENST00000577763 90 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 BX248123.2-201ENST00000606318 124 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 AP001596.2-201ENST00000608410 312 ntBASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CCDC65Q8IXS2 RNU6-1164P-201ENST00000364428 107 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 RNA5SP190-201ENST00000365222 118 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 RNU6-606P-201ENST00000384721 111 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 MIR544A-201ENST00000384855 91 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AL033519.2-201ENST00000403958 392 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 TOMM20P4-201ENST00000427861 435 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AL358934.1-201ENST00000432346 324 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 FDX1P2-201ENST00000450769 375 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 BET1P1-201ENST00000482276 359 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 RNU6-965P-201ENST00000516721 96 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 RN7SKP219-201ENST00000516825 296 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 RNU6-430P-201ENST00000517078 107 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC026271.5-201ENST00000577873 130 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC004908.3-201ENST00000610248 625 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 uc_338.5-201ENST00000611839 155 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC063943.3-201ENST00000615562 356 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AP000770.2-201ENST00000623694 100 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC022418.1-201ENST00000624118 445 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 MIR1248-201ENST00000629190 106 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 AC241585.2-209ENST00000638217 143 ntBASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
CCDC65Q8IXS2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 MIR126-201ENST00000362291 85 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 RNU6-428P-201ENST00000362942 107 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 SNORA75-201ENST00000384158 137 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 RNU6-393P-201ENST00000384475 107 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 MIR29B2-201ENST00000385055 81 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 SNORD70.1-201ENST00000391007 85 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 POLHP1-201ENST00000411806 470 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AL591043.1-201ENST00000432461 424 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 MTND4P32-201ENST00000437189 1237 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 MTND1P26-201ENST00000440488 538 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 LRRC34P2-201ENST00000514850 553 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 RNU6-548P-201ENST00000517083 115 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 MTCO2P4-201ENST00000517968 247 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AP002963.1-201ENST00000530590 184 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AGGF1P4-201ENST00000568249 801 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC008752.3-201ENST00000588113 712 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC040904.1-201ENST00000590850 223 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 BNIP3P25-201ENST00000596023 559 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 AC121247.2-201ENST00000604776 136 ntBASIC1.72□□□□□ -2.13
CCDC65Q8IXS2 ZNF680P1-201ENST00000436625 1469 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AP000648.3-201ENST00000623539 4507 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 RNU6-527P-201ENST00000363425 104 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 RNU6-336P-201ENST00000364891 107 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 SNORD116-8-201ENST00000384365 95 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 RNU6-692P-201ENST00000384496 107 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 RNU6-1222P-201ENST00000384615 107 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 RNU2-9P-201ENST00000410194 145 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 Y_RNA.597-201ENST00000410463 100 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AMD1P1-201ENST00000457220 922 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 SCARNA18-201ENST00000459004 134 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 GMFBP1-201ENST00000467831 427 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 ARL2BPP4-201ENST00000506854 471 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 PTP4A1P4-201ENST00000512479 322 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms