Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC024581.2-201ENST00000619986 252 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 MIR3914-2-201ENST00000637339 95 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 AC068700.1-201ENST00000565862 3754 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 Y_RNA.179-201ENST00000363844 90 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 RNU6-173P-201ENST00000364215 104 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 AC007919.1-201ENST00000429380 217 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 AC104619.4-201ENST00000510773 249 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 RNU6-453P-201ENST00000516819 85 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 AC136628.3-201ENST00000521868 290 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 MIR5195-201ENST00000583555 115 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 AL391813.1-201ENST00000603098 260 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 U6.99-201ENST00000637524 83 ntBASIC4.97□□□□□ -1.61
RC3H1Q5TC82 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RC3H1Q5TC82 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
RC3H1Q5TC82 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
RC3H1Q5TC82 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
RC3H1Q5TC82 AC134026.1-201ENST00000623249 2239 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 U3.15-201ENST00000365398 212 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 MIR616-201ENST00000385293 97 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 GPM6BP3-201ENST00000442797 145 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 AL121914.1-201ENST00000450188 156 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 RNU6-1007P-201ENST00000516586 107 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 NDUFA5P6-201ENST00000542110 379 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 AP002826.1-201ENST00000608835 315 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 AL773545.4-201ENST00000637262 310 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 AL513478.4-201ENST00000641636 310 ntBASIC4.96□□□□□ -1.62
RC3H1Q5TC82 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RC3H1Q5TC82 AL133412.1-201ENST00000380194 2992 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 ZNF702P-202ENST00000434269 1966 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 Y_RNA.251-201ENST00000364551 99 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 Y_RNA.293-201ENST00000364908 93 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 RNU6-643P-201ENST00000384018 107 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 Y_RNA.572-201ENST00000384757 98 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 SNORA26.5-201ENST00000391215 123 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 AL512633.1-201ENST00000399931 655 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 RNU6-436P-201ENST00000516171 114 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 U6.95-201ENST00000636931 70 ntBASIC4.95□□□□□ -1.62
RC3H1Q5TC82 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RC3H1Q5TC82 AC099654.7-201ENST00000635788 2127 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 Y_RNA.24-201ENST00000362508 103 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 SNORA25.7-201ENST00000364375 127 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 RNU6-768P-201ENST00000384683 107 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 RNVU1-14-201ENST00000384770 164 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 MIR199A2-201ENST00000385289 110 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 SNORA3C-201ENST00000408792 125 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 FTH1P6-201ENST00000430768 320 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 NDUFS5P3-201ENST00000450668 321 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 RPS26P28-201ENST00000470806 348 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 RN7SKP18-201ENST00000516005 275 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 RNA5SP164-201ENST00000516533 110 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 MIR3674-201ENST00000636576 68 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 AC068647.2-201ENST00000637380 353 ntBASIC4.94□□□□□ -1.62
RC3H1Q5TC82 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms