Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
NCBP3Q53F19 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.99□□□□□ -1.29
NCBP3Q53F19 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCBP3Q53F19 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCBP3Q53F19 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.98□□□□□ -1.29
NCBP3Q53F19 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.98□□□□□ -1.29
NCBP3Q53F19 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCBP3Q53F19 SNORA33-201ENST00000363664 130 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 RNU6-1235P-201ENST00000384559 107 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 RNU6-788P-201ENST00000390967 104 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.98□□□□□ -1.29
NCBP3Q53F19 COX5BP7-201ENST00000414780 274 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 RPL19P16-201ENST00000433839 588 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 RNU6-498P-201ENST00000459468 107 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 AC007225.2-201ENST00000562529 256 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NCBP3Q53F19 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NCBP3Q53F19 AC092376.2-201ENST00000622621 4116 ntBASIC6.98□□□□□ -1.29
NCBP3Q53F19 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.98□□□□□ -1.29
NCBP3Q53F19 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.98□□□□□ -1.29
NCBP3Q53F19 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCBP3Q53F19 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCBP3Q53F19 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NCBP3Q53F19 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NCBP3Q53F19 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.97□□□□□ -1.29
NCBP3Q53F19 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NCBP3Q53F19 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.97□□□□□ -1.29
NCBP3Q53F19 SNORD31B-201ENST00000364977 69 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 RNU6-750P-201ENST00000390946 107 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 DBIP2-201ENST00000419076 262 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 AC009238.1-201ENST00000442165 424 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 AC009237.6-201ENST00000446969 424 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 RPS21P4-201ENST00000487122 248 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 ATP5LP3-201ENST00000514223 304 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 FAS-AS1.2-201ENST00000620386 170 ntBASIC6.97□□□□□ -1.29
NCBP3Q53F19 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.97□□□□□ -1.29
NCBP3Q53F19 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
NCBP3Q53F19 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NCBP3Q53F19 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NCBP3Q53F19 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
NCBP3Q53F19 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
NCBP3Q53F19 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.97□□□□□ -1.29
NCBP3Q53F19 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NCBP3Q53F19 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.96□□□□□ -1.29
NCBP3Q53F19 AP001029.2-203ENST00000589795 4910 ntBASIC6.96□□□□□ -1.29
NCBP3Q53F19 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NCBP3Q53F19 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC6.96□□□□□ -1.29
NCBP3Q53F19 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.96□□□□□ -1.29
NCBP3Q53F19 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
NCBP3Q53F19 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
NCBP3Q53F19 RNU6-234P-201ENST00000365229 104 ntBASIC6.96□□□□□ -1.3
NCBP3Q53F19 AC004941.2-201ENST00000427009 228 ntBASIC6.96□□□□□ -1.3
NCBP3Q53F19 AC009238.2-201ENST00000431026 355 ntBASIC6.96□□□□□ -1.3
NCBP3Q53F19 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.96□□□□□ -1.3
NCBP3Q53F19 BX510359.5-201ENST00000515651 304 ntBASIC6.96□□□□□ -1.3
NCBP3Q53F19 RPL10P14-201ENST00000565265 298 ntBASIC6.96□□□□□ -1.3
NCBP3Q53F19 RN7SL290P-201ENST00000578661 300 ntBASIC6.96□□□□□ -1.3
NCBP3Q53F19 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC6.96□□□□□ -1.3
NCBP3Q53F19 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.96□□□□□ -1.3
NCBP3Q53F19 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.96□□□□□ -1.3
NCBP3Q53F19 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NCBP3Q53F19 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
NCBP3Q53F19 RNY1P6-201ENST00000384193 109 ntBASIC6.95□□□□□ -1.3
NCBP3Q53F19 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC6.95□□□□□ -1.3
NCBP3Q53F19 AL133162.1-201ENST00000463228 453 ntBASIC6.95□□□□□ -1.3
NCBP3Q53F19 RNU6-1231P-201ENST00000517185 103 ntBASIC6.95□□□□□ -1.3
NCBP3Q53F19 AL110115.1-201ENST00000614396 364 ntBASIC6.95□□□□□ -1.3
NCBP3Q53F19 U3.53-201ENST00000628922 216 ntBASIC6.95□□□□□ -1.3
NCBP3Q53F19 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NCBP3Q53F19 AC009487.4-201ENST00000624969 3585 ntBASIC6.95□□□□□ -1.3
NCBP3Q53F19 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 RNU6-170P-201ENST00000362832 104 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 RNU6-776P-201ENST00000364403 104 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 RNU6-1022P-201ENST00000365049 104 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 SNORD116-22-201ENST00000384430 92 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 MIR589-201ENST00000385238 99 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 TRBV25OR9-2-201ENST00000438417 374 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 HMGN2P16-201ENST00000456802 261 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 RNU7-171P-201ENST00000459581 62 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 PARP4P3-201ENST00000510265 317 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 AL138820.1-201ENST00000617901 5305 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 AL133243.3-201ENST00000617415 3004 ntBASIC6.94□□□□□ -1.3
NCBP3Q53F19 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
NCBP3Q53F19 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms