Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 AL451050.1-201ENST00000450126 415 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RNU6-109P-201ENST00000516364 107 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RNU6-184P-201ENST00000516514 107 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RNU6-107P-201ENST00000516643 102 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RNU1-45P-201ENST00000517191 141 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 AC007012.1-201ENST00000567192 175 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RN7SL600P-201ENST00000581811 299 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 MFSD8-242ENST00000641690 4199 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 Y_RNA.244-201ENST00000364484 109 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 Y_RNA.368-201ENST00000365547 113 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 Y_RNA.544-201ENST00000384650 113 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 AL603914.1-201ENST00000401964 204 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 MIR1263-201ENST00000408324 86 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 RNU6-710P-201ENST00000410424 105 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 AC007919.1-201ENST00000429380 217 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 AC015912.2-201ENST00000571053 181 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 MIR4286-201ENST00000580651 93 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 MIR7154-201ENST00000620673 73 ntBASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CTC1Q2NKJ3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CTC1Q2NKJ3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.71□□□□□ -1.65
CTC1Q2NKJ3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.71□□□□□ -1.65
CTC1Q2NKJ3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CTC1Q2NKJ3 SCN1A-220ENST00000641603 12506 ntBASIC4.71□□□□□ -1.65
CTC1Q2NKJ3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.71□□□□□ -1.65
CTC1Q2NKJ3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 MIR331-201ENST00000362302 94 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 SNORD115-30-201ENST00000364117 82 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 U3.15-201ENST00000365398 212 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 RNU6-136P-201ENST00000384663 107 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 U3.37-201ENST00000408528 213 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 AC098614.2-201ENST00000426040 255 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 AC009237.8-201ENST00000445492 379 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 SNRPGP8-201ENST00000454064 226 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 RN7SL691P-201ENST00000494487 301 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 RNA5SP281-201ENST00000516504 135 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 AC025647.1-201ENST00000517879 253 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 AC131055.1-201ENST00000584626 316 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 U6.99-201ENST00000637524 83 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 CPHL1P-201ENST00000461341 3407 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 AL136964.1-201ENST00000622038 2990 ntBASIC4.71□□□□□ -1.66
CTC1Q2NKJ3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 AL359693.1-201ENST00000614959 2407 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RNU1-108P-201ENST00000362556 161 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 SNORD56.1-201ENST00000362913 68 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RNA5SP387-201ENST00000364226 106 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RNA5SP513-201ENST00000364648 118 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RNU6-1134P-201ENST00000365156 101 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RNA5SP31-201ENST00000411144 127 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RNU2-32P-201ENST00000411193 191 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 snoU13.4-201ENST00000458916 104 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 snoU13.24-201ENST00000458998 104 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 AC010531.2-201ENST00000465012 153 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 RPL39P34-201ENST00000477141 156 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 AC016632.1-201ENST00000503994 196 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 AP004607.1-201ENST00000524456 203 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 MED28P6-201ENST00000558776 231 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 MIR6891-201ENST00000618788 93 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 AC140479.6-201ENST00000633535 357 ntBASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTC1Q2NKJ3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms