Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC007363.1-201ENST00000604736 620 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 BX284668.6-201ENST00000606899 438 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AC104985.3-201ENST00000623479 597 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AC099654.8-201ENST00000637757 681 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 RNU6-222P-201ENST00000362438 107 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 RNU5B-4P-201ENST00000363508 111 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 SNORA4.3-201ENST00000365564 137 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 SNORA25-201ENST00000384384 134 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 RNA5SP390-201ENST00000410191 113 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 RNA5SP511-201ENST00000410487 115 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 RNA5SP127-201ENST00000411051 133 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 UBE2D3P3-201ENST00000426992 425 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AL591704.1-201ENST00000432574 275 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 HSPE1P9-201ENST00000440046 311 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 EEF1E1P1-201ENST00000446998 430 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AL353752.1-201ENST00000454946 260 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 RNU6-333P-201ENST00000459117 107 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 SUMO2P5-201ENST00000506790 245 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AL136520.1-202ENST00000555494 763 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AL157871.3-201ENST00000557231 293 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC078795.2-201ENST00000602835 1252 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 MIR2909-201ENST00000617113 69 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 OR4G3P-201ENST00000633500 913 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 MTND5P33-201ENST00000571250 1450 ntBASIC0.61□□□□□ -2.31
RFX7Q2KHR2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.61□□□□□ -2.31
RFX7Q2KHR2 SNORD3E-201ENST00000362899 217 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 SNORD114-6-201ENST00000364393 72 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 RNU6-395P-201ENST00000365662 106 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 RNU6-622P-201ENST00000384272 103 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 MIR1305-201ENST00000408300 86 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 RN7SKP200-201ENST00000410564 320 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 RPS15AP10-201ENST00000432472 382 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 MTND2P4-201ENST00000445034 1004 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AP000542.1-201ENST00000448473 371 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AL139824.2-201ENST00000458731 1095 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 snoU109.2-201ENST00000459316 135 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 snoU13.14-201ENST00000459372 104 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 MTND1P3-201ENST00000484956 952 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AP003355.1-201ENST00000518956 587 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC026616.1-201ENST00000523157 525 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 BNIP3P16-201ENST00000589779 534 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 MTCO2P2-201ENST00000591258 225 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC022022.2-201ENST00000602989 360 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 BNIP3P31-201ENST00000604515 566 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC090578.1-201ENST00000604955 591 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC092574.1-201ENST00000609771 420 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 AC068205.3-201ENST00000636385 468 ntBASIC0.6□□□□□ -2.31
RFX7Q2KHR2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
RFX7Q2KHR2 SNORD116-20-201ENST00000384529 92 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 MIR520A-201ENST00000384862 85 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 MIR1284-201ENST00000408337 120 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.59□□□□□ -2.31
RFX7Q2KHR2 AL365338.1-201ENST00000422282 858 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 SNX2P2-201ENST00000424553 323 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 AC093899.1-201ENST00000457984 376 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 AC108078.1-201ENST00000508073 725 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 AC097473.1-201ENST00000508142 408 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.59□□□□□ -2.31
RFX7Q2KHR2 RNU6-914P-201ENST00000516749 109 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 RNU6-677P-201ENST00000516914 101 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.59□□□□□ -2.31
RFX7Q2KHR2 AC022893.3-201ENST00000607665 437 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 LINC02555-201ENST00000563933 1951 ntBASIC0.59□□□□□ -2.31
RFX7Q2KHR2 Y_RNA.433-201ENST00000384089 102 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 RNU6-296P-201ENST00000384608 107 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 FCF1P10-201ENST00000407590 479 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 RPS27AP8-201ENST00000452665 445 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 AC006026.2-201ENST00000457376 180 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 RNU1-131P-201ENST00000458943 161 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 MTND2P33-201ENST00000506452 1031 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 AL365204.3-201ENST00000612448 685 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 FRG1KP-201ENST00000623592 341 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 MTND5P42-201ENST00000637720 498 ntBASIC0.58□□□□□ -2.32
RFX7Q2KHR2 AL163152.1-201ENST00000642001 374 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms