Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.88□□□□□ -2.27
HOXC5Q00444 AL031313.1-201ENST00000448435 256 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 OR2AQ1P-201ENST00000451972 200 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 RPL30P7-201ENST00000479312 323 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 ATP5EP1-201ENST00000510257 156 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 AC005741.1-201ENST00000511094 432 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 MTCO3P28-201ENST00000513351 515 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 RNU7-40P-201ENST00000516397 64 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 AC105185.1-201ENST00000518705 535 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 CBX3P8-201ENST00000532412 525 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.88□□□□□ -2.27
HOXC5Q00444 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.88□□□□□ -2.27
HOXC5Q00444 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.88□□□□□ -2.27
HOXC5Q00444 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.88□□□□□ -2.27
HOXC5Q00444 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.88□□□□□ -2.27
HOXC5Q00444 CYP3A52P-201ENST00000563326 91 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 SNORA59B-202ENST00000578183 701 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 AC018645.2-201ENST00000609151 472 ntBASIC0.88□□□□□ -2.27
HOXC5Q00444 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.88□□□□□ -2.27
HOXC5Q00444 RNU6-660P-201ENST00000364566 109 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 RNU6-26P-201ENST00000383985 107 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 SNORA24.1-201ENST00000384401 135 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 RNU6-83P-201ENST00000384568 112 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 RNU6-1222P-201ENST00000384615 107 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 MIR520A-201ENST00000384862 85 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 RPL37P10-201ENST00000412884 288 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.87□□□□□ -2.27
HOXC5Q00444 MTND1P32-201ENST00000433043 938 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 AC099677.2-201ENST00000436385 175 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.87□□□□□ -2.27
HOXC5Q00444 AL163540.1-201ENST00000485382 386 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.87□□□□□ -2.27
HOXC5Q00444 ARL2BPP4-201ENST00000506854 471 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 MTND3P25-201ENST00000509243 135 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 SNORA3.4-201ENST00000515969 96 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.87□□□□□ -2.27
HOXC5Q00444 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.87□□□□□ -2.27
HOXC5Q00444 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.87□□□□□ -2.27
HOXC5Q00444 AC018889.1-201ENST00000605372 397 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 snoU13.31-201ENST00000607291 104 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 SNORD98-201ENST00000636377 67 ntBASIC0.87□□□□□ -2.27
HOXC5Q00444 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.86□□□□□ -2.27
HOXC5Q00444 RNU1-22P-201ENST00000363334 158 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 RNU6-931P-201ENST00000363850 107 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 RNU6-641P-201ENST00000384006 107 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 RNU6-1176P-201ENST00000390955 107 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 AL355143.1-201ENST00000407101 841 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 AC245047.4-201ENST00000433189 144 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 MTND1P30-201ENST00000441241 901 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 snoU109.3-201ENST00000459477 145 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.86□□□□□ -2.27
HOXC5Q00444 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 MTND3P5-201ENST00000512798 333 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 MTND4LP18-201ENST00000526864 291 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.86□□□□□ -2.27
HOXC5Q00444 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.86□□□□□ -2.27
HOXC5Q00444 AP001004.1-201ENST00000582468 324 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.86□□□□□ -2.27
HOXC5Q00444 AP003465.2-201ENST00000602571 373 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 AC069114.2-201ENST00000604699 304 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 AL355802.3-201ENST00000607571 545 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.86□□□□□ -2.27
HOXC5Q00444 AC083806.3-201ENST00000614016 455 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 AL359740.1-201ENST00000624340 592 ntBASIC0.86□□□□□ -2.27
HOXC5Q00444 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.86□□□□□ -2.27
HOXC5Q00444 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
HOXC5Q00444 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HOXC5Q00444 RNU6-1285P-201ENST00000363480 105 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 RNU6-371P-201ENST00000364283 108 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 RNU6-157P-201ENST00000383957 107 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 SNORA12.2-201ENST00000391040 156 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 RPL23AP36-201ENST00000413895 458 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 C8orf59P1-201ENST00000429930 303 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.85□□□□□ -2.27
HOXC5Q00444 AC119618.1-201ENST00000434191 222 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.85□□□□□ -2.27
HOXC5Q00444 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.85□□□□□ -2.27
HOXC5Q00444 RNU5A-4P-201ENST00000516588 111 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.85□□□□□ -2.27
HOXC5Q00444 AC115990.1-201ENST00000526957 301 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 AC087883.1-201ENST00000551882 391 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 AC073539.2-201ENST00000597113 165 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 AC004492.1-201ENST00000607036 742 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 AC019226.2-201ENST00000625973 424 ntBASIC0.85□□□□□ -2.27
HOXC5Q00444 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.85□□□□□ -2.27
HOXC5Q00444 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HOXC5Q00444 AC010615.1-201ENST00000594254 1764 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 RNU6-862P-201ENST00000362804 105 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 RNU4-1-201ENST00000363925 141 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 RNU6-438P-201ENST00000365561 103 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 RNU6-360P-201ENST00000390944 104 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 MTCYBP36-201ENST00000404146 440 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.84□□□□□ -2.27
HOXC5Q00444 EBAG9P1-201ENST00000418955 543 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 MTCO2P21-201ENST00000419780 677 ntBASIC0.84□□□□□ -2.27
HOXC5Q00444 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.84□□□□□ -2.27
HOXC5Q00444 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 901.3 ms