Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 Y_RNA.573-201ENST00000384763 105 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 MIR95-201ENST00000385072 81 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 RNU6-908P-201ENST00000410160 94 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 RNU2-23P-201ENST00000410545 195 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 AL591043.1-201ENST00000432461 424 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFRSF4P43489 AC068781.1-201ENST00000488231 618 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 CCDC34P1-201ENST00000507441 517 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 AC079140.5-201ENST00000507882 310 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 SNORD60.2-201ENST00000516883 86 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 SNORA48.11-201ENST00000517015 89 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 MTND4LP26-201ENST00000518144 282 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFRSF4P43489 Z82243.1-201ENST00000609432 473 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 AC092794.1-201ENST00000612734 582 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 DISC2.1-201ENST00000612827 205 ntBASIC2.14□□□□□ -2.07
TNFRSF4P43489 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TNFRSF4P43489 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TNFRSF4P43489 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNU6-212P-201ENST00000362642 104 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 Y_RNA.89-201ENST00000363031 102 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNY3P3-201ENST00000363816 102 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 SNORA3A-201ENST00000364113 130 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 Y_RNA.295-201ENST00000364918 102 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNU4-20P-201ENST00000365601 151 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNU1-138P-201ENST00000384093 164 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 MIR561-201ENST00000385216 97 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNA5SP219-201ENST00000390940 113 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFRSF4P43489 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFRSF4P43489 MTND3P16-201ENST00000452205 344 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AC008571.1-201ENST00000467232 300 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 MTCO3P38-201ENST00000468910 766 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFRSF4P43489 MTCYBP40-201ENST00000509390 1135 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNU6-586P-201ENST00000517265 104 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AC118273.2-201ENST00000532092 465 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AC004486.1-201ENST00000546846 233 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AC093249.1-201ENST00000567049 203 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AC010525.2-201ENST00000590920 195 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AP003465.2-201ENST00000602571 373 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AC092747.3-201ENST00000603769 301 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 AL670379.2-201ENST00000604983 252 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.13□□□□□ -2.07
TNFRSF4P43489 AL160394.1-201ENST00000624765 724 ntBASIC2.13□□□□□ -2.07
TNFRSF4P43489 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TNFRSF4P43489 RNU6-451P-201ENST00000362921 107 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6-529P-201ENST00000363383 104 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6-1210P-201ENST00000363775 107 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 Y_RNA.231-201ENST00000364358 102 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 Y_RNA.256-201ENST00000364594 104 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6-534P-201ENST00000364877 106 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6-38P-201ENST00000384085 107 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6-1032P-201ENST00000384100 107 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TNFRSF4P43489 U8.13-201ENST00000390842 128 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 SNORA26.9-201ENST00000391322 122 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.12□□□□□ -2.07
TNFRSF4P43489 AC019129.1-201ENST00000403786 261 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFRSF4P43489 AC011753.1-201ENST00000451001 220 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 AP000705.1-201ENST00000454567 350 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6-333P-201ENST00000459117 107 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 SNORA31.15-201ENST00000516771 132 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 MTND1P5-201ENST00000517906 940 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.12□□□□□ -2.07
TNFRSF4P43489 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 MIR4424-201ENST00000585257 86 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFRSF4P43489 AC002044.1-201ENST00000606707 158 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TNFRSF4P43489 AL353997.5-201ENST00000618886 171 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFRSF4P43489 U4.7-201ENST00000638126 106 ntBASIC2.12□□□□□ -2.07
TNFRSF4P43489 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.12□□□□□ -2.07
TNFRSF4P43489 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TNFRSF4P43489 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.11□□□□□ -2.07
TNFRSF4P43489 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-37P-201ENST00000362692 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 SNORA25.6-201ENST00000364121 118 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-266P-201ENST00000364225 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-11P-201ENST00000364234 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-25P-201ENST00000383873 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-1-201ENST00000383898 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-48P-201ENST00000384161 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-36P-201ENST00000384172 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-4P-201ENST00000384205 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-5P-201ENST00000384238 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-3P-201ENST00000384314 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-16P-201ENST00000384385 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-15P-201ENST00000384534 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-2-201ENST00000384627 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-29P-201ENST00000384637 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-9-201ENST00000384776 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 RNU6-33P-201ENST00000384793 107 ntBASIC2.11□□□□□ -2.07
TNFRSF4P43489 MIR1277-201ENST00000408536 78 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms