Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC12P31275 GZMAP1-201ENST00000503054 631 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 RNU6-1338P-201ENST00000516328 91 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 RNA5SP54-201ENST00000516951 92 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 SNORA31.21-201ENST00000517180 77 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 GNRHR2P1-201ENST00000555315 631 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 AC025281.1-201ENST00000567026 265 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC12P31275 RNU6-91P-201ENST00000607774 107 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 AC099778.2-201ENST00000610904 211 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC12P31275 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXC12P31275 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HOXC12P31275 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC12P31275 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC12P31275 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC12P31275 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HOXC12P31275 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC12P31275 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC12P31275 Y_RNA.16-201ENST00000362421 102 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 SNORD81.1-201ENST00000363064 77 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 SNORD114-19-201ENST00000363072 75 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 RNU6-280P-201ENST00000364145 104 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 RNU4-56P-201ENST00000364700 142 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 Y_RNA.416-201ENST00000384014 113 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 Y_RNA.541-201ENST00000384640 113 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 MIR329-1-201ENST00000385028 80 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 Y_RNA.581-201ENST00000391017 97 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 SNORA48.8-201ENST00000391324 134 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC12P31275 AC009310.1-201ENST00000414414 451 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 AC096649.2-201ENST00000416186 393 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC12P31275 RN7SL585P-201ENST00000470538 280 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC12P31275 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC12P31275 AC006517.1-201ENST00000480485 328 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 RN7SL271P-201ENST00000487601 295 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC12P31275 RNU5F-2P-201ENST00000516066 82 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 SNORA31.6-201ENST00000516241 130 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 SCARNA24.2-201ENST00000516968 130 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 MIR3136-201ENST00000583498 78 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 AC010900.2-201ENST00000604508 210 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 AC007179.3-201ENST00000604976 235 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 AC084757.4-201ENST00000616350 526 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 AL591424.2-201ENST00000617023 128 ntBASIC3.57□□□□□ -1.84
HOXC12P31275 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC12P31275 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC12P31275 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC12P31275 AC073073.2-201ENST00000609827 2578 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HOXC12P31275 SNORA73.2-201ENST00000364946 201 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 RNU6-1145P-201ENST00000384246 107 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HOXC12P31275 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC12P31275 HMGB1P37-201ENST00000439613 609 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 AC010095.1-201ENST00000443543 144 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC12P31275 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC12P31275 AC006483.1-201ENST00000487308 313 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 RNU7-143P-201ENST00000516781 65 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 RNU6-111P-201ENST00000517179 105 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 MIR432-201ENST00000606207 94 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 AC011373.1-201ENST00000607270 237 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 AC019176.2-201ENST00000611579 315 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 AL121772.2-201ENST00000614331 297 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 U7.8-201ENST00000619968 63 ntBASIC3.56□□□□□ -1.84
HOXC12P31275 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC12P31275 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC12P31275 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC12P31275 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
HOXC12P31275 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC12P31275 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC12P31275 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC12P31275 ZNF204P-201ENST00000416749 2397 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.55□□□□□ -1.84
HOXC12P31275 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC12P31275 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC12P31275 RNA5SP124-201ENST00000362739 110 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 Y_RNA.54-201ENST00000362766 105 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 RNU6-873P-201ENST00000363833 107 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 RNA5SP97-201ENST00000365006 84 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 SNORD63-201ENST00000384262 68 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 MIR549A-201ENST00000385268 96 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 MIR208B-201ENST00000401172 77 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 RPS26P42-201ENST00000413485 326 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 CYCSP48-201ENST00000417124 323 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC12P31275 AC005002.2-201ENST00000438228 269 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC12P31275 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC12P31275 RNU6-496P-201ENST00000516145 99 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 SNORA25.14-201ENST00000516481 132 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 IGLV3-26-201ENST00000520756 302 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC12P31275 CYP4A27P-201ENST00000567218 190 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 AL391813.1-201ENST00000603098 260 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 AL137843.1-201ENST00000605078 385 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms