Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC112220.2-201ENST00000605513 533 ntBASIC-0.99□□□□□ -2.57
TOP2AP11388 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.99□□□□□ -2.57
TOP2AP11388 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.99□□□□□ -2.57
TOP2AP11388 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1□□□□□ -2.57
TOP2AP11388 Y_RNA.35-201ENST00000362601 101 ntBASIC-1□□□□□ -2.57
TOP2AP11388 RNY4P24-201ENST00000362735 96 ntBASIC-1□□□□□ -2.57
TOP2AP11388 RNU1-39P-201ENST00000383897 165 ntBASIC-1□□□□□ -2.57
TOP2AP11388 RNU6-611P-201ENST00000384276 104 ntBASIC-1□□□□□ -2.57
TOP2AP11388 AP002371.1-201ENST00000463604 433 ntBASIC-1□□□□□ -2.57
TOP2AP11388 AC104689.1-201ENST00000473356 768 ntBASIC-1□□□□□ -2.57
TOP2AP11388 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-1□□□□□ -2.57
TOP2AP11388 AC010376.1-201ENST00000522101 334 ntBASIC-1□□□□□ -2.57
TOP2AP11388 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-1□□□□□ -2.57
TOP2AP11388 AL355297.3-201ENST00000604082 446 ntBASIC-1□□□□□ -2.57
TOP2AP11388 RNU2-48P-201ENST00000410694 191 ntBASIC-1.01□□□□□ -2.57
TOP2AP11388 AL139396.1-201ENST00000421137 167 ntBASIC-1.01□□□□□ -2.57
TOP2AP11388 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-1.01□□□□□ -2.57
TOP2AP11388 AL441985.1-201ENST00000457727 251 ntBASIC-1.01□□□□□ -2.57
TOP2AP11388 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-1.01□□□□□ -2.57
TOP2AP11388 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-1.01□□□□□ -2.57
TOP2AP11388 ABBA01006766.1-201ENST00000584728 294 ntBASIC-1.01□□□□□ -2.57
TOP2AP11388 AL391099.1-201ENST00000624635 187 ntBASIC-1.01□□□□□ -2.57
TOP2AP11388 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-1.01□□□□□ -2.57
TOP2AP11388 SNORD115-41-201ENST00000363608 82 ntBASIC-1.02□□□□□ -2.57
TOP2AP11388 SNORA40.8-201ENST00000411034 126 ntBASIC-1.02□□□□□ -2.57
TOP2AP11388 SNX3P1X-201ENST00000414887 175 ntBASIC-1.02□□□□□ -2.57
TOP2AP11388 MTCYBP29-201ENST00000436327 1006 ntBASIC-1.02□□□□□ -2.57
TOP2AP11388 AC004865.1-201ENST00000442276 1003 ntBASIC-1.02□□□□□ -2.57
TOP2AP11388 AL096829.2-201ENST00000446582 742 ntBASIC-1.02□□□□□ -2.57
TOP2AP11388 NFU1P2-201ENST00000448700 469 ntBASIC-1.02□□□□□ -2.57
TOP2AP11388 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-1.02□□□□□ -2.57
TOP2AP11388 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
TOP2AP11388 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-1.03□□□□□ -2.57
TOP2AP11388 MTCYBP32-201ENST00000427945 1084 ntBASIC-1.03□□□□□ -2.57
TOP2AP11388 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-1.03□□□□□ -2.57
TOP2AP11388 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-1.03□□□□□ -2.57
TOP2AP11388 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-1.03□□□□□ -2.57
TOP2AP11388 SNORA25.11-201ENST00000515935 105 ntBASIC-1.03□□□□□ -2.57
TOP2AP11388 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.03□□□□□ -2.57
TOP2AP11388 AL161729.4-201ENST00000604650 476 ntBASIC-1.03□□□□□ -2.57
TOP2AP11388 AC005021.1-201ENST00000608730 355 ntBASIC-1.03□□□□□ -2.57
TOP2AP11388 MTCO2P34-201ENST00000421994 607 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 MTND1P28-201ENST00000435623 950 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 GXYLT1P1-201ENST00000446657 490 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 RNU7-21P-201ENST00000459430 62 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 LSM6P2-201ENST00000552208 177 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 AC027288.2-201ENST00000553028 243 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-1.04□□□□□ -2.58
TOP2AP11388 AC012065.4-201ENST00000602445 679 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 AL670379.3-201ENST00000605040 251 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
TOP2AP11388 ANKRD26P2-201ENST00000445530 1710 ntBASIC-1.04□□□□□ -2.58
TOP2AP11388 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-1.05□□□□□ -2.58
TOP2AP11388 MIR548B-201ENST00000385247 97 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-1.05□□□□□ -2.58
TOP2AP11388 ELOCP24-201ENST00000456370 334 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 RPL36AP48-201ENST00000485521 314 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-1.05□□□□□ -2.58
TOP2AP11388 AL157871.3-201ENST00000557231 293 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 MIR548Y-201ENST00000582739 110 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 AC005261.5-201ENST00000596280 355 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 MTND4P4-201ENST00000439033 1366 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-1.05□□□□□ -2.58
TOP2AP11388 RNU6-1110P-201ENST00000516462 101 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-1.05□□□□□ -2.58
TOP2AP11388 MIR3666-201ENST00000607845 111 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 AC093648.1-201ENST00000623546 606 ntBASIC-1.05□□□□□ -2.58
TOP2AP11388 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
TOP2AP11388 SNORD71-201ENST00000411292 86 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 MTCO3P43-201ENST00000440974 771 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 RNU7-159P-201ENST00000459284 62 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 AC114755.3-201ENST00000481111 251 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 AC091860.1-201ENST00000505723 432 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 RNU6-1256P-201ENST00000516539 103 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 RNU5A-4P-201ENST00000516588 111 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 SNORD19.2-201ENST00000516978 73 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-1.06□□□□□ -2.58
TOP2AP11388 LRRC34P1-201ENST00000542742 915 ntBASIC-1.06□□□□□ -2.58
TOP2AP11388 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
TOP2AP11388 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.06□□□□□ -2.58
TOP2AP11388 ZNF849P-201ENST00000594711 1566 ntBASIC-1.07□□□□□ -2.58
TOP2AP11388 MIR892B-201ENST00000401279 77 ntBASIC-1.07□□□□□ -2.58
TOP2AP11388 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-1.07□□□□□ -2.58
TOP2AP11388 CTHRC1P1-201ENST00000605383 469 ntBASIC-1.07□□□□□ -2.58
TOP2AP11388 AC016542.1-201ENST00000608259 493 ntBASIC-1.07□□□□□ -2.58
TOP2AP11388 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 SUGT1P1-201ENST00000379514 476 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 MIR888-201ENST00000401186 77 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 PRRC2CP1-201ENST00000404428 159 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 RNA5SP504-201ENST00000410676 117 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 MTND4LP10-201ENST00000435146 291 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 MTND4P32-201ENST00000437189 1237 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-1.08□□□□□ -2.58
TOP2AP11388 RNU7-165P-201ENST00000458864 60 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 AP001324.2-201ENST00000461163 319 ntBASIC-1.08□□□□□ -2.58
TOP2AP11388 AC122134.1-202ENST00000569111 1201 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms