Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.13□□□□□ -2.23
CCDC172P0C7W6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AL391987.6-201ENST00000305671 199 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 RNU6-438P-201ENST00000365561 103 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AC004965.1-201ENST00000413033 213 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 MTCO2P21-201ENST00000419780 677 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 SNRPEP10-201ENST00000420249 274 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 RPL37P21-201ENST00000435890 276 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 MTCYBP39-201ENST00000437562 491 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AC079140.3-201ENST00000511111 550 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 RNU5A-4P-201ENST00000516588 111 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 RNA5SP481-201ENST00000516814 122 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AC087883.1-201ENST00000551882 391 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 MIR5692A1-201ENST00000580523 69 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC172P0C7W6 NIFKP6-201ENST00000598115 845 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AC069114.2-201ENST00000604699 304 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AL157786.1-207ENST00000627771 695 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 U4.7-201ENST00000638126 106 ntBASIC1.12□□□□□ -2.23
CCDC172P0C7W6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 RNU6-39P-201ENST00000384344 107 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 SNORA24.1-201ENST00000384401 135 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 RNU6-809P-201ENST00000384461 107 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 RNA5SP111-201ENST00000411386 101 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AC137499.1-201ENST00000427602 88 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 snoU13.30-201ENST00000458951 104 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 HMGN2P9-201ENST00000476875 229 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 RBBP4P6-201ENST00000508098 202 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 HSPE1P23-201ENST00000509838 286 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 ATP5EP1-201ENST00000510257 156 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 SNORD60.2-201ENST00000516883 86 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 ZNF519P3-201ENST00000557158 1032 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 MIR4524B-201ENST00000581569 115 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AP001004.1-201ENST00000582468 324 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AC008521.1-201ENST00000587471 187 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AP000942.3-201ENST00000603702 160 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 MIR8065-201ENST00000620577 100 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 AC009033.1-201ENST00000624279 431 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 SNORD98-201ENST00000636377 67 ntBASIC1.11□□□□□ -2.23
CCDC172P0C7W6 RNU6-862P-201ENST00000362804 105 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 RNA5SP99-201ENST00000364020 114 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 SNORA12.2-201ENST00000391040 156 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 C1DP2-201ENST00000418167 426 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 CALM2P2-201ENST00000428512 440 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC172P0C7W6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.1□□□□□ -2.23
CCDC172P0C7W6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC172P0C7W6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC172P0C7W6 MTCO3P28-201ENST00000513351 515 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC172P0C7W6 AC109446.1-201ENST00000566172 220 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 MIR3136-201ENST00000583498 78 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 AC110760.3-201ENST00000598794 467 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 AL590229.1-201ENST00000603497 542 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 RNU6-87P-201ENST00000607561 108 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 AL139418.1-201ENST00000613613 177 ntBASIC1.1□□□□□ -2.23
CCDC172P0C7W6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC172P0C7W6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 RNU6-157P-201ENST00000383957 107 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 RNU6-636P-201ENST00000384598 107 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 RNU6-1245P-201ENST00000411130 106 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 AC243964.1-201ENST00000441814 261 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 AL031313.1-201ENST00000448435 256 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 EXOSC3P1-201ENST00000448649 500 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC172P0C7W6 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 MTND3P25-201ENST00000509243 135 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 AC004492.1-201ENST00000607036 742 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 AC083806.3-201ENST00000614016 455 ntBASIC1.09□□□□□ -2.23
CCDC172P0C7W6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC172P0C7W6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC172P0C7W6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AL159152.1-201ENST00000635019 2587 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 RNU6-105P-201ENST00000363909 104 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 RNU4-1-201ENST00000363925 141 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 SNORA63D-201ENST00000364359 132 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 MIR194-1-201ENST00000384892 85 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 RNU6-1176P-201ENST00000390955 107 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 SNORD115.1-201ENST00000391109 76 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 MTCYBP2-201ENST00000407745 171 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 RNU2-39P-201ENST00000410604 198 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms