Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AL606923.1-201ENST00000406616 190 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 MIR548F1-201ENST00000408667 84 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.6□□□□□ -2.15
MRPL3P09001 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.6□□□□□ -2.15
MRPL3P09001 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MRPL3P09001 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.6□□□□□ -2.15
MRPL3P09001 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 MTND3P16-201ENST00000452205 344 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 RNU7-167P-201ENST00000459160 62 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 AC008549.1-201ENST00000512900 643 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.6□□□□□ -2.15
MRPL3P09001 MIR4299-201ENST00000577899 72 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 AC012557.2-201ENST00000605919 418 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 AC026585.1-201ENST00000619582 524 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 AC091932.3-201ENST00000624223 323 ntBASIC1.6□□□□□ -2.15
MRPL3P09001 MTND4P14-201ENST00000435799 1354 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
MRPL3P09001 Y_RNA.40-201ENST00000362645 93 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 RNU6-451P-201ENST00000362921 107 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 RNU6-1215P-201ENST00000384441 102 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
MRPL3P09001 HMGN2P39-201ENST00000398005 273 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AL590002.1-201ENST00000406554 418 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AL030996.1-201ENST00000411430 235 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AC074117.2-201ENST00000417130 397 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.59□□□□□ -2.15
MRPL3P09001 AL121601.2-201ENST00000438019 707 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.59□□□□□ -2.15
MRPL3P09001 RPL21P99-201ENST00000480369 423 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 HMGB1P35-201ENST00000503360 598 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 HMGB3P17-201ENST00000504195 649 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
MRPL3P09001 RNU6-1281P-201ENST00000516223 105 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 MTND4P7-201ENST00000523876 130 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.59□□□□□ -2.15
MRPL3P09001 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.59□□□□□ -2.15
MRPL3P09001 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.59□□□□□ -2.15
MRPL3P09001 AC023050.3-201ENST00000541142 333 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.59□□□□□ -2.15
MRPL3P09001 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
MRPL3P09001 VN1R80P-201ENST00000597126 338 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AC243960.4-201ENST00000600532 288 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AC021646.1-201ENST00000605469 484 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AC004492.1-201ENST00000607036 742 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AC097372.5-201ENST00000623665 376 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 AC064859.1-201ENST00000624741 174 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 SCARNA4-202ENST00000625402 129 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 MIR1321-201ENST00000637766 79 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 U4.7-201ENST00000638126 106 ntBASIC1.59□□□□□ -2.15
MRPL3P09001 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
MRPL3P09001 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.58□□□□□ -2.16
MRPL3P09001 AC138393.1-203ENST00000327086 343 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 MIR449A-201ENST00000362113 91 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RNU6-428P-201ENST00000362942 107 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RNU6-522P-201ENST00000364497 107 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RNU4-66P-201ENST00000365199 138 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RNU6-1032P-201ENST00000384100 107 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 Y_RNA.481-201ENST00000384373 102 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RNA5SP219-201ENST00000390940 113 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 SNORD56-201ENST00000413522 71 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.58□□□□□ -2.16
MRPL3P09001 TIMM9P3-201ENST00000428659 274 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.58□□□□□ -2.16
MRPL3P09001 MTND3P21-201ENST00000433774 331 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AL353689.1-201ENST00000438895 199 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AL161788.1-201ENST00000441805 169 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AC007969.2-201ENST00000441891 191 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.58□□□□□ -2.16
MRPL3P09001 CYP2C59P-201ENST00000457790 269 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.58□□□□□ -2.16
MRPL3P09001 ANXA2P1-201ENST00000505539 926 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 MRPS17P9-201ENST00000511924 393 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MRPL3P09001 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.58□□□□□ -2.16
MRPL3P09001 CENPUP1-201ENST00000526649 1202 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AC079598.5-201ENST00000547460 117 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AC074050.1-201ENST00000563247 211 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AC136619.2-201ENST00000563361 631 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AC010525.2-201ENST00000590920 195 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.58□□□□□ -2.16
MRPL3P09001 AL096840.1-201ENST00000603287 93 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 RMST_3.1-201ENST00000611651 109 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 AC090517.2-201ENST00000614966 680 ntBASIC1.58□□□□□ -2.16
MRPL3P09001 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
MRPL3P09001 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.58□□□□□ -2.16
MRPL3P09001 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.58□□□□□ -2.16
MRPL3P09001 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.57□□□□□ -2.16
MRPL3P09001 SNORD56.1-201ENST00000362913 68 ntBASIC1.57□□□□□ -2.16
MRPL3P09001 RNU6-529P-201ENST00000363383 104 ntBASIC1.57□□□□□ -2.16
MRPL3P09001 RNU5E-7P-201ENST00000365290 117 ntBASIC1.57□□□□□ -2.16
MRPL3P09001 RNA5SP240-201ENST00000365355 128 ntBASIC1.57□□□□□ -2.16
MRPL3P09001 MIR181A1-201ENST00000385026 110 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms