Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU4-15P-201ENST00000362613 141 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 RNU6-653P-201ENST00000363074 106 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 RNU6-324P-201ENST00000363957 106 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 Y_RNA.329-201ENST00000365209 107 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 MIR186-201ENST00000384988 86 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 SNORA11F-201ENST00000408237 128 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 MIR548I2-201ENST00000408348 149 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 RN7SKP202-201ENST00000410439 330 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 AC012671.1-201ENST00000451912 203 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 RPS3P1-201ENST00000456781 192 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 PPIAP15-201ENST00000479662 484 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 RPL23AP70-201ENST00000483361 460 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 AC145146.1-201ENST00000496370 254 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 RNA5SP143-201ENST00000516936 115 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 TVP23BP1-201ENST00000557500 617 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 AC025281.1-201ENST00000567026 265 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 RPL23AP97-201ENST00000568955 471 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 AC108706.1-201ENST00000611053 297 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 AC112484.5-201ENST00000624189 228 ntBASIC4.04□□□□□ -1.76
PDGFAP04085 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFAP04085 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFAP04085 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFAP04085 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFAP04085 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
PDGFAP04085 AC018555.1-201ENST00000567548 1980 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFAP04085 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.03□□□□□ -1.76
PDGFAP04085 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFAP04085 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDGFAP04085 MIR554-201ENST00000384874 96 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 MIR921-201ENST00000401133 56 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 U3.40-201ENST00000408706 208 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AC004386.2-201ENST00000441858 148 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AC091179.1-201ENST00000461606 579 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
PDGFAP04085 RPL31P41-201ENST00000477967 372 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFAP04085 MIR5006-201ENST00000583027 110 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFAP04085 AC020914.4-201ENST00000597690 277 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AC079587.1-201ENST00000603846 277 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AL008718.3-201ENST00000610217 321 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 MIR6875-201ENST00000617506 72 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFAP04085 AL034408.1-202ENST00000636088 415 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 AC068205.3-201ENST00000636385 468 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFAP04085 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFAP04085 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDGFAP04085 LINC02471-203ENST00000641941 4752 ntBASIC4.03□□□□□ -1.76
PDGFAP04085 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
PDGFAP04085 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
PDGFAP04085 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
PDGFAP04085 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFAP04085 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFAP04085 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.02□□□□□ -1.77
PDGFAP04085 RNA5SP130-201ENST00000364431 114 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 SNORD50.2-201ENST00000365465 70 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 RNU1-57P-201ENST00000384491 166 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 MIR3065-201ENST00000390137 79 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 CYCSP19-201ENST00000411715 316 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.02□□□□□ -1.77
PDGFAP04085 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFAP04085 AL162151.2-201ENST00000448875 158 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.02□□□□□ -1.77
PDGFAP04085 HMGB3P3-201ENST00000510526 400 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 AC026241.1-201ENST00000517873 2142 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.02□□□□□ -1.77
PDGFAP04085 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFAP04085 GNRHR2P1-201ENST00000555315 631 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFAP04085 AL133393.1-201ENST00000603277 287 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 AC004832.4-201ENST00000608952 331 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 uc_338.32-201ENST00000615087 172 ntBASIC4.02□□□□□ -1.77
PDGFAP04085 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFAP04085 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
PDGFAP04085 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFAP04085 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFAP04085 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.01□□□□□ -1.77
PDGFAP04085 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFAP04085 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFAP04085 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.01□□□□□ -1.77
PDGFAP04085 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.01□□□□□ -1.77
PDGFAP04085 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDGFAP04085 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFAP04085 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFAP04085 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFAP04085 RNU6-704P-201ENST00000364162 103 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 SNORA62.3-201ENST00000365110 153 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 SNORD113-1-201ENST00000365321 69 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 SNORA70.4-201ENST00000365509 134 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 Y_RNA.441-201ENST00000384123 112 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 Y_RNA.571-201ENST00000384753 98 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 RNU6-1135P-201ENST00000411083 103 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.01□□□□□ -1.77
PDGFAP04085 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.01□□□□□ -1.77
PDGFAP04085 HLA-N-201ENST00000437516 135 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 489.2 ms