Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MIR3199-2-201ENST00000636243 86 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC112487.2-201ENST00000637950 304 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 HAUS6P2-201ENST00000433254 2404 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 ADAM3A-203ENST00000461344 2157 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN1O95832 AC026241.1-201ENST00000517873 2142 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 RNU6-105P-201ENST00000363909 104 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 RNU6-487P-201ENST00000365430 104 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AL512633.1-201ENST00000399931 655 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 FTH1P15-201ENST00000406984 280 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 MIR548F5-201ENST00000408421 86 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 RNU2-49P-201ENST00000410666 184 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 HMGN2P35-201ENST00000412164 270 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.32□□□□□ -2.04
CLDN1O95832 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN1O95832 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN1O95832 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN1O95832 RPS3AP52-201ENST00000435639 297 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AL161651.1-201ENST00000440882 223 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN1O95832 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN1O95832 AC090525.1-201ENST00000479116 478 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN1O95832 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN1O95832 TRAV32-201ENST00000553993 340 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AC007151.1-201ENST00000572774 483 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 MIR3605-201ENST00000583214 100 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN1O95832 AL391813.1-201ENST00000603098 260 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AL121917.1-203ENST00000605534 577 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN1O95832 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AC092593.1-201ENST00000515413 1815 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AC080128.1-201ENST00000474389 1917 ntBASIC2.32□□□□□ -2.04
CLDN1O95832 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN1O95832 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CLDN1O95832 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN1O95832 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLDN1O95832 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLDN1O95832 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN1O95832 MIR26A1-201ENST00000362205 77 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 Y_RNA.61-201ENST00000362835 102 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 RNU4-73P-201ENST00000363164 141 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 RNU6-593P-201ENST00000364716 112 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 RNU6-827P-201ENST00000365553 106 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN1O95832 AC074085.1-201ENST00000413598 418 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN1O95832 DPH3P2-201ENST00000422618 250 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 FABP5P14-201ENST00000437273 393 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 MED28P2-201ENST00000475771 317 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 RN7SL297P-201ENST00000483161 293 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 AC132942.1-201ENST00000486753 483 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN1O95832 CKS1BP2-201ENST00000497342 240 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 RNU6-581P-201ENST00000516214 105 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 RNU6-273P-201ENST00000516937 96 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 ACA59.2-201ENST00000517061 156 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 AC104576.1-201ENST00000524225 88 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.31□□□□□ -2.04
CLDN1O95832 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN1O95832 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN1O95832 CPDP1-201ENST00000579660 283 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 ZNF861P-201ENST00000588126 639 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 AC243960.4-201ENST00000600532 288 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 MIR1302-1-201ENST00000637932 143 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN1O95832 AC010889.1-201ENST00000566193 2666 ntBASIC2.31□□□□□ -2.04
CLDN1O95832 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN1O95832 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLDN1O95832 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CLDN1O95832 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CLDN1O95832 SNORD62.1-201ENST00000362541 86 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 RNU1-105P-201ENST00000363470 161 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 RNU6-336P-201ENST00000364891 107 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 RNU6-1280P-201ENST00000365211 107 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN1O95832 RNU6-748P-201ENST00000384648 107 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AL030996.1-201ENST00000411430 235 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.3□□□□□ -2.04
CLDN1O95832 PTGES3P4-201ENST00000426243 356 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 RPS15AP10-201ENST00000432472 382 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AC112220.1-201ENST00000434628 355 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AC107399.1-201ENST00000451226 265 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 RNU7-187P-201ENST00000458985 68 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AC003982.1-202ENST00000469928 248 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 MTND4P17-201ENST00000470444 350 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 SRIP1-201ENST00000489235 288 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 RPS27P26-201ENST00000494583 239 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN1O95832 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.3□□□□□ -2.04
CLDN1O95832 AC009163.5-201ENST00000575421 637 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.3□□□□□ -2.04
CLDN1O95832 BNIP3P16-201ENST00000589779 534 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AC113139.1-201ENST00000605049 239 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 AL133215.3-201ENST00000609801 448 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms