Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
RCCD1A6NED2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RCCD1A6NED2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RCCD1A6NED2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCCD1A6NED2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCCD1A6NED2 RNA5SP113-201ENST00000410486 84 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 HLA-N-201ENST00000437516 135 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 RPL36AP21-201ENST00000490372 323 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 AC015795.1-201ENST00000513669 327 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 HSPE1P18-201ENST00000517602 280 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 RPL23AP97-201ENST00000568955 471 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 AL137843.1-201ENST00000605078 385 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 RPL17P51-201ENST00000605218 238 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 AL591926.4-201ENST00000616895 298 ntBASIC4.79□□□□□ -1.64
RCCD1A6NED2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCCD1A6NED2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.79□□□□□ -1.64
RCCD1A6NED2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCCD1A6NED2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCCD1A6NED2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
RCCD1A6NED2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCCD1A6NED2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCCD1A6NED2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCCD1A6NED2 AC007496.3-201ENST00000624987 3443 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCCD1A6NED2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RCCD1A6NED2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RCCD1A6NED2 MIR586-201ENST00000385035 97 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 AL603914.1-201ENST00000401964 204 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 MIR1185-2-201ENST00000408687 86 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 RN7SKP267-201ENST00000410381 285 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 Y_RNA.617-201ENST00000410920 90 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 AL590762.4-201ENST00000425885 253 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 AL445584.1-201ENST00000431451 330 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 AC006028.1-201ENST00000438379 402 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 RPL23AP62-201ENST00000463396 453 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 RPL23AP54-201ENST00000495129 419 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.78□□□□□ -1.64
RCCD1A6NED2 MIR4436B2-201ENST00000581415 91 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 MIR4436B1-201ENST00000583272 91 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 AC012493.2-201ENST00000595083 291 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.78□□□□□ -1.64
RCCD1A6NED2 snoZ196.1-201ENST00000625269 89 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 AC016588.2-201ENST00000632484 3021 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCCD1A6NED2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.78□□□□□ -1.64
RCCD1A6NED2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCCD1A6NED2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCCD1A6NED2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.78□□□□□ -1.64
RCCD1A6NED2 AC069528.2-201ENST00000624849 1991 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 AC026241.1-201ENST00000517873 2142 ntBASIC4.78□□□□□ -1.64
RCCD1A6NED2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.65
RCCD1A6NED2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RCCD1A6NED2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCCD1A6NED2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCCD1A6NED2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCCD1A6NED2 RNA5SP307-201ENST00000362863 116 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 RNU6-674P-201ENST00000363831 107 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 RNU4-41P-201ENST00000364426 143 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 Y_RNA.346-201ENST00000365385 112 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 MIR3065-201ENST00000390137 79 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 RN7SKP284-201ENST00000411002 343 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 RN7SKP100-201ENST00000411258 284 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.77□□□□□ -1.65
RCCD1A6NED2 RPL39P40-201ENST00000445481 146 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.77□□□□□ -1.65
RCCD1A6NED2 RPS26P45-201ENST00000471748 340 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC006445.2-201ENST00000510061 472 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC023141.12-201ENST00000512399 199 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 RNU6-1299P-201ENST00000516316 100 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 Y_RNA.677-201ENST00000516401 85 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 RNU6-537P-201ENST00000517277 103 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC091178.2-201ENST00000584401 117 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC005972.2-201ENST00000604690 348 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 Mico1.1-201ENST00000611698 204 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 MIR6891-201ENST00000618788 93 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 MIR6853-201ENST00000619642 74 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC007546.2-201ENST00000623996 360 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 BMS1P21-201ENST00000634565 365 ntBASIC4.77□□□□□ -1.65
RCCD1A6NED2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.77□□□□□ -1.65
RCCD1A6NED2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCCD1A6NED2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCCD1A6NED2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RCCD1A6NED2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCCD1A6NED2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RCCD1A6NED2 RNU1-15P-201ENST00000353977 144 ntBASIC4.76□□□□□ -1.65
RCCD1A6NED2 MIR450A1-201ENST00000362262 91 ntBASIC4.76□□□□□ -1.65
RCCD1A6NED2 RNU6-1210P-201ENST00000363775 107 ntBASIC4.76□□□□□ -1.65
RCCD1A6NED2 RN7SKP103-201ENST00000363848 320 ntBASIC4.76□□□□□ -1.65
RCCD1A6NED2 RNU6-1164P-201ENST00000364428 107 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms