Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC027124.2-201ENST00000428249 105 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 snoU13.14-201ENST00000459372 104 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-1007P-201ENST00000516586 107 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-453P-201ENST00000516819 85 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 SNORD19.2-201ENST00000516978 73 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AC134698.5-201ENST00000519444 336 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AC112693.2-201ENST00000556538 232 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AC090877.1-201ENST00000561418 344 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 RPS15AP11-201ENST00000594193 385 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 ARF4P1-201ENST00000605447 541 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AL391261.4-201ENST00000616012 481 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 TUG1_4.1-201ENST00000619464 181 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB11Q9Y5F2 RNU1-75P-201ENST00000347264 129 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 Y_RNA.40-201ENST00000362645 93 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-529P-201ENST00000363383 104 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-153P-201ENST00000364422 104 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-1325P-201ENST00000364905 105 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-969P-201ENST00000383900 105 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-80P-201ENST00000384195 107 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-19P-201ENST00000384718 107 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RPS26P8-201ENST00000393490 348 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-855P-201ENST00000410395 104 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RPS12P10-201ENST00000427031 377 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RPL23AP93-201ENST00000440847 484 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RN7SL41P-201ENST00000476144 297 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RN7SL810P-201ENST00000493031 276 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 AC026402.1-201ENST00000513642 170 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 RNA5SP446-201ENST00000515955 82 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 MIR5688-201ENST00000580619 83 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 MIR3609-201ENST00000582661 80 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 AC091152.3-201ENST00000604227 325 ntBASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB11Q9Y5F2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-1010P-201ENST00000362757 107 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 Y_RNA.310-201ENST00000365063 113 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 Y_RNA.361-201ENST00000365515 120 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 Y_RNA.456-201ENST00000384232 111 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 AC006461.1-201ENST00000412637 326 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 RNU7-197P-201ENST00000458836 62 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 RNA5SP310-201ENST00000459084 116 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 RPL21P126-201ENST00000470049 478 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 Y_RNA.686-201ENST00000516548 134 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 RNU1-117P-201ENST00000517041 158 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 VN1R85P-201ENST00000601587 426 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 LINC00901.1-201ENST00000617252 152 ntBASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB11Q9Y5F2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-834P-201ENST00000362367 110 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 U3.9-201ENST00000363823 204 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 Y_RNA.341-201ENST00000365341 102 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AL133475.1-201ENST00000404414 305 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AIMP1P2-201ENST00000425294 312 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AL121914.1-201ENST00000450188 156 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AC245047.8-201ENST00000456455 284 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms