Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 AC090877.1-201ENST00000561418 344 ntBASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 MIR4643-201ENST00000577473 78 ntBASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 AL451007.1-201ENST00000595491 289 ntBASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 AC006386.2-201ENST00000624491 75 ntBASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 AC012005.1-201ENST00000624575 75 ntBASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 CEP170P1-201ENST00000502249 4587 ntBASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 LINC02471-203ENST00000641941 4752 ntBASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIT1Q9Y3P8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 FAM35BP-202ENST00000497389 3337 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.83-201ENST00000363005 113 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.270-201ENST00000364693 104 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RNA5SP167-201ENST00000365461 116 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RNU6-281P-201ENST00000384212 103 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RNU6-1035P-201ENST00000384477 107 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 MIR10B-201ENST00000385011 110 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RNU6-159P-201ENST00000391080 106 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RNA5SP129-201ENST00000410276 118 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RPL21P104-201ENST00000464143 478 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 COX6CP14-201ENST00000469580 174 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RPL26P26-201ENST00000480251 434 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 RPS27AP10-201ENST00000496103 208 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 AC093663.1-201ENST00000497190 394 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 SCARNA24.2-201ENST00000516968 130 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 CBX3P4-201ENST00000538909 354 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 AC020895.1-201ENST00000595362 272 ntBASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SIT1Q9Y3P8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 SNORD56.1-201ENST00000362913 68 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.319-201ENST00000365138 92 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.464-201ENST00000384282 110 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 SNORA53-201ENST00000391141 249 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 PCNPP3-201ENST00000393579 471 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 FTH1P15-201ENST00000406984 280 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 SNORD12B-201ENST00000410433 91 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 AC017079.2-201ENST00000416102 485 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 AC078809.1-201ENST00000427601 140 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 HLA-N-201ENST00000437516 135 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 MRPL42P6-201ENST00000486397 371 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 AC016632.1-201ENST00000503994 196 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 BTF3L4P4-201ENST00000506381 449 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 RNU6-789P-201ENST00000517105 102 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 SNORA31.23-201ENST00000517219 133 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 AL110115.1-201ENST00000614396 364 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 U4.6-201ENST00000621618 127 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIT1Q9Y3P8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.44-201ENST00000362676 108 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.150-201ENST00000363562 102 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 RNU6-487P-201ENST00000365430 104 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 MIR708-201ENST00000390708 88 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 SNORA26.3-201ENST00000391119 136 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 AL390729.2-201ENST00000416137 156 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 AL358075.3-201ENST00000426289 226 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 HMGN2P10-201ENST00000448085 265 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.644-201ENST00000459006 113 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 RNU7-120P-201ENST00000459334 63 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 AC073901.1-201ENST00000462471 408 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 PPBPP1-201ENST00000510807 373 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.674-201ENST00000516362 113 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 AL138963.2-201ENST00000605137 226 ntBASIC3.59□□□□□ -1.83
SIT1Q9Y3P8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.59□□□□□ -1.84
SIT1Q9Y3P8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SIT1Q9Y3P8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.58□□□□□ -1.84
SIT1Q9Y3P8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIT1Q9Y3P8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
SIT1Q9Y3P8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms