Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 SNAP23P1-201ENST00000433229 246 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-333P-201ENST00000459117 107 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-991P-201ENST00000516168 107 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AC007834.2-201ENST00000536310 343 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 TRAV32-201ENST00000553993 340 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AC008088.1-201ENST00000580993 280 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 AP000654.2-201ENST00000605633 586 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 SNORA5B-201ENST00000363786 132 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 SNORD32A-201ENST00000364805 84 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-517P-201ENST00000384362 110 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 RN7SKP61-201ENST00000410642 295 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 RPL23AP95-201ENST00000426806 265 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC010975.2-201ENST00000427781 588 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC244670.1-201ENST00000436879 112 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 SNRPFP3-201ENST00000457792 225 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 RNU7-167P-201ENST00000459160 62 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC145146.1-201ENST00000496370 254 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AL356057.1-201ENST00000533798 831 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC009063.1-201ENST00000563342 702 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 BNIP3P25-201ENST00000596023 559 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC107304.1-201ENST00000604229 296 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AL356157.2-201ENST00000605122 111 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 AC008536.2-201ENST00000607284 349 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.58□□□□□ -2.16
KCNIP3Q9Y2W7 MTND5P6-201ENST00000422338 1798 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 SNORA80A-201ENST00000363922 136 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 RNU6-1103P-201ENST00000384150 107 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 SNORA75-201ENST00000384158 137 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 SNORA26.3-201ENST00000391119 136 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 SNORA12-201ENST00000391162 147 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AL356432.1-201ENST00000405809 419 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 MTCYBP2-201ENST00000407745 171 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AL357139.1-201ENST00000407792 426 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 RNA5SP501-201ENST00000410990 112 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AL139156.1-201ENST00000412785 841 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AC078809.1-201ENST00000427601 140 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AC132942.1-201ENST00000486753 483 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AC069113.1-201ENST00000517763 267 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AP005660.1-201ENST00000522972 293 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 OSBPL9P5-201ENST00000542581 171 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 MTATP6P3-201ENST00000581686 676 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 CYP2C61P-201ENST00000604072 290 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AL033523.1-201ENST00000605153 153 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 AL022345.1-201ENST00000607292 135 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 MIR219B-201ENST00000637023 88 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.57□□□□□ -2.16
KCNIP3Q9Y2W7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 RNA5SP289-201ENST00000362332 137 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 RNA5SP387-201ENST00000364226 106 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 RNU5A-6P-201ENST00000384136 116 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 RNU4-53P-201ENST00000410828 140 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC009310.1-201ENST00000414414 451 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 CETN4P-201ENST00000432407 469 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AL031274.1-201ENST00000450334 232 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 SNORA31.16-201ENST00000516773 139 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 HIF1AP1-201ENST00000553642 175 ntBASIC1.56□□□□□ -2.16
KCNIP3Q9Y2W7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms