Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RNF39Q9H2S5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6□□□□□ -1.45
RNF39Q9H2S5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6□□□□□ -1.45
RNF39Q9H2S5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6□□□□□ -1.45
RNF39Q9H2S5 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6□□□□□ -1.45
RNF39Q9H2S5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 Y_RNA.494-201ENST00000384432 111 ntBASIC6□□□□□ -1.45
RNF39Q9H2S5 MIR493-201ENST00000385254 89 ntBASIC6□□□□□ -1.45
RNF39Q9H2S5 SPTLC1P2-201ENST00000407089 121 ntBASIC6□□□□□ -1.45
RNF39Q9H2S5 RNU7-99P-201ENST00000516271 62 ntBASIC6□□□□□ -1.45
RNF39Q9H2S5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6□□□□□ -1.45
RNF39Q9H2S5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
RNF39Q9H2S5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC6□□□□□ -1.45
RNF39Q9H2S5 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6□□□□□ -1.45
RNF39Q9H2S5 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
RNF39Q9H2S5 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC6□□□□□ -1.45
RNF39Q9H2S5 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6□□□□□ -1.45
RNF39Q9H2S5 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6□□□□□ -1.45
RNF39Q9H2S5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RNF39Q9H2S5 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6□□□□□ -1.45
RNF39Q9H2S5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RNF39Q9H2S5 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF39Q9H2S5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 AC144833.1-201ENST00000567953 4089 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 RNU6-154P-201ENST00000384306 106 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 SNORD116-24-201ENST00000384549 92 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 SNORA40.6-201ENST00000391153 128 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 RNA5SP261-201ENST00000410536 106 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 snoU13.24-201ENST00000458998 104 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 RN7SL30P-201ENST00000488416 306 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 MIR4762-201ENST00000585261 75 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 U6.108-201ENST00000637764 58 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 AC079776.5-201ENST00000641920 211 ntBASIC5.99□□□□□ -1.45
RNF39Q9H2S5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF39Q9H2S5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 RNU6-446P-201ENST00000362827 106 ntBASIC5.98□□□□□ -1.45
RNF39Q9H2S5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.98□□□□□ -1.45
RNF39Q9H2S5 Y_RNA.625-201ENST00000411256 107 ntBASIC5.98□□□□□ -1.45
RNF39Q9H2S5 SNORD19.2-201ENST00000516978 73 ntBASIC5.98□□□□□ -1.45
RNF39Q9H2S5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 MIR8053-201ENST00000613344 75 ntBASIC5.98□□□□□ -1.45
RNF39Q9H2S5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RNF39Q9H2S5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 MIR133B-201ENST00000362210 119 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 RN7SKP113-201ENST00000363891 295 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 SNORA80E-201ENST00000384744 137 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 MIR105-2-201ENST00000385083 81 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 MIR147B-201ENST00000390185 80 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 AL139148.1-201ENST00000427122 680 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 CST9LP2-201ENST00000437612 320 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 HMGB1P22-201ENST00000505315 124 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 MRPS21P9-201ENST00000571150 257 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms