Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS11Q9H270 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS11Q9H270 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
VPS11Q9H270 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS11Q9H270 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS11Q9H270 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS11Q9H270 SNORD50.1-201ENST00000362987 71 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RNU6-778P-201ENST00000363269 103 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 Y_RNA.324-201ENST00000365165 102 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 Y_RNA.398-201ENST00000383952 99 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RNU1-73P-201ENST00000383971 164 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS11Q9H270 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS11Q9H270 RNU6-700P-201ENST00000391043 107 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RPL21P75-201ENST00000396599 483 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RPL21P28-201ENST00000401418 483 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS11Q9H270 Y_RNA.602-201ENST00000410535 92 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RNU6-1025P-201ENST00000410629 104 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RNU6-651P-201ENST00000411040 105 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS11Q9H270 AL353621.1-201ENST00000418219 243 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RPS15AP6-201ENST00000420703 385 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AL590556.1-201ENST00000423231 483 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RPL37P4-201ENST00000448908 268 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS11Q9H270 HSPE1P25-201ENST00000455484 251 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS11Q9H270 RPL26P9-201ENST00000457466 433 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 U8.22-201ENST00000459141 133 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RPL21P39-201ENST00000463605 483 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AP002884.2-201ENST00000471647 395 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AC132942.1-201ENST00000486753 483 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RPL30P10-201ENST00000488148 337 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AC093591.1-201ENST00000491435 481 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 RPL21P16-201ENST00000495531 483 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS11Q9H270 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS11Q9H270 RNU1-103P-201ENST00000516502 125 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AC087499.8-201ENST00000578406 226 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 MIR3144-201ENST00000579460 79 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS11Q9H270 AP001485.1-201ENST00000604799 199 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS11Q9H270 AC004852.3-201ENST00000614131 326 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AL161629.2-201ENST00000615347 275 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 AL354798.1-201ENST00000622505 329 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 MFSD8-236ENST00000641509 4050 ntBASIC3.58□□□□□ -1.84
VPS11Q9H270 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS11Q9H270 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS11Q9H270 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS11Q9H270 SNORD113-8-201ENST00000363497 74 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 RN7SKP280-201ENST00000364196 304 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 RNU6-933P-201ENST00000384424 107 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 RNU6-1117P-201ENST00000384525 104 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 AL079342.1-201ENST00000401460 267 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 RNU6-628P-201ENST00000410675 107 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 RNU6-394P-201ENST00000410735 107 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS11Q9H270 AC098614.2-201ENST00000426040 255 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 HIGD1AP2-201ENST00000446367 280 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 NUTF2P7-201ENST00000453086 375 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 RN7SL442P-201ENST00000473804 320 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 MRPL42P6-201ENST00000486397 371 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 MTND5P9-201ENST00000503854 1755 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 SNORA31.21-201ENST00000517180 77 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS11Q9H270 MIR5692A1-201ENST00000580523 69 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 AC072026.1-201ENST00000605023 201 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 AC104465.1-201ENST00000611365 139 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 AC068724.3-201ENST00000625906 87 ntBASIC3.57□□□□□ -1.84
VPS11Q9H270 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS11Q9H270 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VPS11Q9H270 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS11Q9H270 SRP72P2-201ENST00000344851 1979 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 Y_RNA.8-201ENST00000362353 102 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 RNU6-1020P-201ENST00000363684 107 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 RNU6-937P-201ENST00000384325 106 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 RNU6-22P-201ENST00000384355 107 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 RNU1-101P-201ENST00000391171 127 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 MTCYBP2-201ENST00000407745 171 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 CYCSP32-201ENST00000440548 321 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 AC079354.2-201ENST00000453523 154 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 AC133134.1-201ENST00000466800 359 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS11Q9H270 SEPT14P8-201ENST00000508026 178 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 AC025755.1-201ENST00000521306 278 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 NACAP3-201ENST00000552100 481 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 H3F3AP1-201ENST00000559984 334 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 AC007224.1-201ENST00000564410 144 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 ZYXP1-201ENST00000617638 118 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 U6.106-201ENST00000636360 105 ntBASIC3.56□□□□□ -1.84
VPS11Q9H270 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS11Q9H270 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS11Q9H270 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
VPS11Q9H270 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms