Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC107393.1-201ENST00000512403 346 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 RNU6-496P-201ENST00000516145 99 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 RNU6-1012P-201ENST00000516606 109 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 MIR3910-1-201ENST00000580936 111 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC010928.2-201ENST00000588017 287 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC010620.2-201ENST00000600135 313 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC084757.4-201ENST00000616350 526 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 U4.7-201ENST00000638126 106 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC233981.2-201ENST00000611524 1614 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC009541.1-201ENST00000438279 2662 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 RNU6-1301P-201ENST00000362724 104 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 RNU6-884P-201ENST00000363889 107 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 MIR888-201ENST00000401186 77 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AL358453.1-201ENST00000422522 250 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 HMGN2P30-201ENST00000423237 256 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 RPL23AP82-202ENST00000427528 469 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AP000907.1-201ENST00000428428 510 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AL445305.1-201ENST00000432577 575 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 HMGB3P8-201ENST00000449709 577 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 NDUFB4P10-201ENST00000452541 359 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 PRSS3P4-201ENST00000453323 162 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 snoU13.30-201ENST00000458951 104 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 snoU13.28-201ENST00000459235 104 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 MIR2355-201ENST00000517199 87 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AC087441.2-201ENST00000529141 262 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AP002392.1-201ENST00000537692 208 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 MIR7975-201ENST00000619350 68 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 AC091903.1-201ENST00000624322 454 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 U6.99-201ENST00000637524 83 ntBASIC3.76□□□□□ -1.81
RNF38Q9H0F5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF38Q9H0F5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 MIR411-201ENST00000362239 96 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 Y_RNA.76-201ENST00000362931 109 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 RNU6-290P-201ENST00000365212 101 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 AC017079.2-201ENST00000416102 485 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 CYCSP35-201ENST00000451978 304 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 MIR3186-201ENST00000577404 85 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 MIR4474-201ENST00000579189 78 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 AC007179.3-201ENST00000604976 235 ntBASIC3.75□□□□□ -1.81
RNF38Q9H0F5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF38Q9H0F5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 RNU6-879P-201ENST00000364328 108 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 RNU4-9P-201ENST00000364951 139 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 RNU6-968P-201ENST00000384076 107 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 RNU6-662P-201ENST00000384253 104 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 RNU6-72P-201ENST00000384285 79 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 MIR34B-201ENST00000385076 84 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 AC098614.2-201ENST00000426040 255 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 HMGN2P20-201ENST00000437531 273 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 AC009296.1-201ENST00000443146 155 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 AL353705.4-201ENST00000449661 238 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 RBMY2UP-201ENST00000453474 324 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 AC010099.1-201ENST00000455434 375 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 HSPE1P25-201ENST00000455484 251 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 SNORA31.1-201ENST00000515993 133 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 SNORA31.5-201ENST00000516190 133 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 SNORA25.14-201ENST00000516481 132 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 RNU1-103P-201ENST00000516502 125 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 AP000867.2-201ENST00000532468 320 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 CBX3P4-201ENST00000538909 354 ntBASIC3.74□□□□□ -1.81
RNF38Q9H0F5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms