Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 TRAV37-201ENST00000553906 342 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 HSBP1P1-201ENST00000555205 166 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 MIR4273-201ENST00000582824 84 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 AC008962.1-201ENST00000605729 304 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 U2.1-201ENST00000618978 145 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 MIR8062-201ENST00000621515 85 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 MIR4272-201ENST00000635924 64 ntBASIC3.42□□□□□ -1.86
SALL3Q9BXA9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.42□□□□□ -1.86
SALL3Q9BXA9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 RPL9P7-201ENST00000330965 580 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 RNU6-874P-201ENST00000362390 105 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 RNU5A-1-201ENST00000362698 116 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 Y_RNA.106-201ENST00000363189 100 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 RNU1-112P-201ENST00000364401 164 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 Y_RNA.489-201ENST00000384410 101 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 RNU4-70P-201ENST00000384579 139 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 RPL21P40-201ENST00000428586 483 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 AC112220.1-201ENST00000434628 355 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 MIR892C-201ENST00000516410 77 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 AP005902.1-201ENST00000521358 186 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 ATP5F1P5-201ENST00000526403 760 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 EIF4BP1-201ENST00000554881 351 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.41□□□□□ -1.86
SALL3Q9BXA9 HMGB1P24-202ENST00000615653 685 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 Z99571.1-201ENST00000636677 394 ntBASIC3.41□□□□□ -1.86
SALL3Q9BXA9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SALL3Q9BXA9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 FTLP6-201ENST00000355274 422 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 RNA5SP432-201ENST00000362480 116 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 RNU6-1167P-201ENST00000363227 94 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.314-201ENST00000365114 102 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.526-201ENST00000384572 110 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.551-201ENST00000384661 102 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 RNU6-1179P-201ENST00000384667 107 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 SNORA19-201ENST00000384737 128 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 SNORD73A-201ENST00000386062 65 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AL591034.2-201ENST00000402839 359 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AL592045.1-201ENST00000429867 352 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AL031274.1-201ENST00000450334 232 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 HMGN2P13-201ENST00000476476 274 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC103975.1-201ENST00000482506 483 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC113155.1-201ENST00000511141 769 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 RNU1-86P-201ENST00000516108 154 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 RNU1-107P-201ENST00000516617 154 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC093331.1-201ENST00000521474 169 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC131281.1-201ENST00000522984 164 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC104576.1-201ENST00000524225 88 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AL157871.3-201ENST00000557231 293 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AL121917.1-203ENST00000605534 577 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC006386.2-201ENST00000624491 75 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AC012005.1-201ENST00000624575 75 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 AL512643.1-201ENST00000635735 524 ntBASIC3.4□□□□□ -1.87
SALL3Q9BXA9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SALL3Q9BXA9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 RNY1P16-201ENST00000363063 111 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 RNU6-450P-201ENST00000364654 107 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 RNU6-790P-201ENST00000384479 105 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 RPL21P1-201ENST00000399532 476 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 RPS15AP10-201ENST00000432472 382 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 AC107083.1-201ENST00000439643 279 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 RN7SL297P-201ENST00000483161 293 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 SCARNA15.2-201ENST00000516409 127 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.715-201ENST00000517082 110 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 AC144568.1-201ENST00000520139 137 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.39□□□□□ -1.87
SALL3Q9BXA9 MIR3921-201ENST00000577308 85 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 MIR3605-201ENST00000583214 100 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 MIR5188-201ENST00000583467 113 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 AL451007.1-201ENST00000595491 289 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms