Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-105P-201ENST00000363909 104 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 Y_RNA.324-201ENST00000365165 102 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 MIR1-2-201ENST00000384961 85 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 MIR454-201ENST00000390180 115 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 MIR934-201ENST00000401241 83 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 ART2BP-201ENST00000453501 499 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AL033528.1-201ENST00000453780 140 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 SNORD13-201ENST00000459299 104 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AC093259.1-201ENST00000509755 300 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 RNU5F-2P-201ENST00000516066 82 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 RNU6-1178P-201ENST00000516674 107 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AL356057.1-201ENST00000533798 831 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 MTATP6P24-201ENST00000576835 677 ntBASIC1.71□□□□□ -2.14
RPRD1AQ96P16 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
RPRD1AQ96P16 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU1-58P-201ENST00000362413 163 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-37P-201ENST00000362692 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-11P-201ENST00000364234 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-108P-201ENST00000365558 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-25P-201ENST00000383873 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-1-201ENST00000383898 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-48P-201ENST00000384161 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-36P-201ENST00000384172 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-4P-201ENST00000384205 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-5P-201ENST00000384238 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-3P-201ENST00000384314 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU5A-2P-201ENST00000384337 116 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-16P-201ENST00000384385 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-15P-201ENST00000384534 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-1222P-201ENST00000384615 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-2-201ENST00000384627 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-29P-201ENST00000384637 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-9-201ENST00000384776 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-33P-201ENST00000384793 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNA5SP501-201ENST00000410990 112 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 VN1R36P-201ENST00000414936 291 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 CBX3P6-201ENST00000430257 527 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 HSPE1P21-201ENST00000438283 308 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RPS29P15-201ENST00000458329 171 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-991P-201ENST00000516168 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 MIR3198-2-201ENST00000577868 80 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 MIR4255-201ENST00000579351 72 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 AC064872.1-201ENST00000604823 1072 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 RNU6-6P-201ENST00000606623 107 ntBASIC1.7□□□□□ -2.14
RPRD1AQ96P16 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.7□□□□□ -2.14
RPRD1AQ96P16 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC006026.1-201ENST00000444025 1803 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 RNA5SP432-201ENST00000362480 116 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 RNU6-1285P-201ENST00000363480 105 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 RNU6-1029P-201ENST00000384109 107 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 MT-TH-201ENST00000387441 69 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 RNA5SP213-201ENST00000391031 106 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AL596276.1-201ENST00000434465 418 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 RNU7-182P-201ENST00000459009 62 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 SNORD42A-201ENST00000459584 64 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 RNU6-237P-201ENST00000515985 71 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC137800.2-201ENST00000574375 120 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC123912.5-201ENST00000605470 343 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
RPRD1AQ96P16 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.69□□□□□ -2.14
RPRD1AQ96P16 Y_RNA.99-201ENST00000363138 105 ntBASIC1.68□□□□□ -2.14
RPRD1AQ96P16 RNU6-1097P-201ENST00000363586 107 ntBASIC1.68□□□□□ -2.14
RPRD1AQ96P16 RNU6-482P-201ENST00000391068 107 ntBASIC1.68□□□□□ -2.14
RPRD1AQ96P16 RNU6-248P-201ENST00000410720 107 ntBASIC1.68□□□□□ -2.14
RPRD1AQ96P16 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.68□□□□□ -2.14
RPRD1AQ96P16 UBE2V1P4-201ENST00000425374 344 ntBASIC1.68□□□□□ -2.14
RPRD1AQ96P16 AL445567.1-201ENST00000439121 144 ntBASIC1.68□□□□□ -2.14
RPRD1AQ96P16 AC243964.1-201ENST00000441814 261 ntBASIC1.68□□□□□ -2.14
RPRD1AQ96P16 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms