Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
DDX11Q96FC9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
DDX11Q96FC9 RNU6-212P-201ENST00000362642 104 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 RNU6-428P-201ENST00000362942 107 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 MIR628-201ENST00000385229 95 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
DDX11Q96FC9 RNA5SP494-201ENST00000410653 129 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX11Q96FC9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX11Q96FC9 SSXP4-201ENST00000451349 245 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 AC079354.2-201ENST00000453523 154 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 U8.21-201ENST00000459536 136 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 RPS29P27-201ENST00000463711 170 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 RPS20P22-201ENST00000473700 357 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 RN7SL442P-201ENST00000473804 320 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 RPL30P10-201ENST00000488148 337 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX11Q96FC9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX11Q96FC9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX11Q96FC9 AL161629.2-201ENST00000615347 275 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 AP001282.2-201ENST00000616149 309 ntBASIC3.91□□□□□ -1.78
DDX11Q96FC9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DDX11Q96FC9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DDX11Q96FC9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
DDX11Q96FC9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DDX11Q96FC9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
DDX11Q96FC9 RNU1-76P-201ENST00000362903 159 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 Y_RNA.416-201ENST00000384014 113 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 MIR10A-201ENST00000385043 110 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 RNU2-33P-201ENST00000410344 192 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC007919.1-201ENST00000429380 217 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 RPS27P29-201ENST00000463110 252 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC098869.1-201ENST00000481627 292 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX11Q96FC9 AL355877.2-201ENST00000603670 358 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC009779.6-201ENST00000603972 165 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AL162713.1-201ENST00000604480 262 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC099778.2-201ENST00000610904 211 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC009318.2-201ENST00000610917 651 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AC004852.3-201ENST00000614131 326 ntBASIC3.9□□□□□ -1.79
DDX11Q96FC9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX11Q96FC9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
DDX11Q96FC9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.89□□□□□ -1.79
DDX11Q96FC9 AC007496.3-201ENST00000624987 3443 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX11Q96FC9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX11Q96FC9 MIR335-201ENST00000362173 94 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 RNU1-70P-201ENST00000362618 164 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 Y_RNA.111-201ENST00000363248 100 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 Y_RNA.539-201ENST00000384635 107 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 SNORA48.5-201ENST00000391143 135 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 MIR548H3-201ENST00000408771 118 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 RNA5SP293-201ENST00000410527 113 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 RNU6-1203P-201ENST00000410703 110 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 RNU2-25P-201ENST00000411041 191 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
DDX11Q96FC9 MTND3P9-201ENST00000429526 346 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 MTCO3P29-201ENST00000432119 779 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 HMGN2P20-201ENST00000437531 273 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 AC004383.1-201ENST00000438135 289 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX11Q96FC9 AC013470.1-201ENST00000453438 462 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 HMGN1P18-201ENST00000457642 277 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 RPL21P13-201ENST00000488305 481 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 RN7SL504P-201ENST00000494496 287 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 HMGB1P35-201ENST00000503360 598 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 SNORA70.16-201ENST00000516390 95 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX11Q96FC9 AMZ2P1-203ENST00000565833 850 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 AC002076.2-201ENST00000617362 122 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.89□□□□□ -1.79
DDX11Q96FC9 CUL1P1-201ENST00000509510 2425 ntBASIC3.89□□□□□ -1.79
DDX11Q96FC9 Y_RNA.27-201ENST00000362540 103 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 Y_RNA.84-201ENST00000363011 104 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 Y_RNA.458-201ENST00000384240 102 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 RNU6-166P-201ENST00000384371 107 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 Y_RNA.555-201ENST00000384673 110 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 MIR493-201ENST00000385254 89 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 SNORA40C-201ENST00000391285 128 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 SNORD58.1-201ENST00000391313 66 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 AL356867.1-201ENST00000429623 299 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX11Q96FC9 AC067942.3-201ENST00000512025 362 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 SNORA31.19-201ENST00000517079 126 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX11Q96FC9 RRN3P3-201ENST00000549207 578 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 AC243829.7-201ENST00000633081 225 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 AC017071.1-201ENST00000564407 2204 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
DDX11Q96FC9 AC008568.2-201ENST00000623862 2313 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 AC091152.2-201ENST00000591628 2569 ntBASIC3.88□□□□□ -1.79
DDX11Q96FC9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX11Q96FC9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX11Q96FC9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms