Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RPS29P13-201ENST00000402041 169 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.2□□□□□ -2.06
CASC4Q6P4E1 RNU6-333P-201ENST00000459117 107 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 UBE2DNL-203ENST00000474922 222 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 AC009646.1-201ENST00000510455 318 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 Y_RNA.693-201ENST00000516641 110 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 RN7SKP256-201ENST00000517201 314 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 AC034114.1-201ENST00000520293 285 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 CENPUP1-201ENST00000526649 1202 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 CYCSP27-201ENST00000527643 293 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 MIR3126-201ENST00000577443 74 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.2□□□□□ -2.06
CASC4Q6P4E1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.2□□□□□ -2.06
CASC4Q6P4E1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CASC4Q6P4E1 Y_RNA.41-201ENST00000362646 102 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 RNU6-43P-201ENST00000384302 107 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 Y_RNA.517-201ENST00000384551 106 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 RNU6-648P-201ENST00000410190 107 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.19□□□□□ -2.06
CASC4Q6P4E1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 PSPHP1-201ENST00000450062 261 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 AK3P2-201ENST00000507976 429 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 SNORA14.1-201ENST00000516113 141 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 RNU6-189P-201ENST00000516120 101 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.19□□□□□ -2.06
CASC4Q6P4E1 AP000763.2-201ENST00000540641 163 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 MIR4435-1-201ENST00000582552 80 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 AC092954.2-201ENST00000609103 430 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CASC4Q6P4E1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CASC4Q6P4E1 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
CASC4Q6P4E1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CASC4Q6P4E1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CASC4Q6P4E1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.18□□□□□ -2.06
CASC4Q6P4E1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU4-82P-201ENST00000362443 140 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU4-40P-201ENST00000364351 143 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU4-66P-201ENST00000365199 138 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 MIR29B2-201ENST00000385055 81 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 SNORD73A-201ENST00000386062 65 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU2-48P-201ENST00000410694 191 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU2-32P-201ENST00000411193 191 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 POLHP1-201ENST00000411806 470 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AL135786.1-201ENST00000415892 214 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 WARS2P1-201ENST00000429678 537 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RPS15AP10-201ENST00000432472 382 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 MTND1P1-201ENST00000445453 368 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU7-138P-201ENST00000459479 64 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 SNRPGP7-201ENST00000469016 106 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AC019235.1-201ENST00000503847 207 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU6-667P-201ENST00000517186 102 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AC115990.1-201ENST00000526957 301 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AL512360.1-201ENST00000555346 234 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.18□□□□□ -2.06
CASC4Q6P4E1 MIR4513-201ENST00000581077 86 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 VN1R107P-201ENST00000601784 209 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AC092747.3-201ENST00000603769 301 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AC103705.1-201ENST00000619013 241 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 AC131280.1-202ENST00000624067 4211 ntBASIC2.18□□□□□ -2.06
CASC4Q6P4E1 RNU6-82P-201ENST00000363970 107 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 SNORD32A-201ENST00000364805 84 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 AL445529.1-201ENST00000398713 389 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 USP9YP18-201ENST00000425912 695 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 SNAP23P1-201ENST00000433229 246 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.17□□□□□ -2.06
CASC4Q6P4E1 GPM6BP3-201ENST00000442797 145 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 AL031659.1-201ENST00000447075 539 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 AC107953.1-201ENST00000522216 297 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.17□□□□□ -2.06
CASC4Q6P4E1 AC063943.3-201ENST00000615562 356 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 YWHAEP7-203ENST00000622054 312 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
CASC4Q6P4E1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.16□□□□□ -2.06
CASC4Q6P4E1 MIR449A-201ENST00000362113 91 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CASC4Q6P4E1 RNU6-546P-201ENST00000383991 107 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 SNORA11.4-201ENST00000408823 129 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 RNU4-53P-201ENST00000410828 140 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 HMGB3P2-201ENST00000411913 584 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.16□□□□□ -2.06
CASC4Q6P4E1 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 TIMM9P3-201ENST00000428659 274 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.16□□□□□ -2.06
CASC4Q6P4E1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.16□□□□□ -2.06
CASC4Q6P4E1 SNORA59A-201ENST00000459326 152 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
CASC4Q6P4E1 HMGB1P35-201ENST00000503360 598 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms