Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RC3H1Q5TC82 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 MTND5P35-201ENST00000557537 1720 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 RNU5F-3P-201ENST00000363767 117 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 RNU6-1180P-201ENST00000364935 107 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 RNU6-1310P-201ENST00000384153 107 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 U3.37-201ENST00000408528 213 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 RNA5SP31-201ENST00000411144 127 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 AC006026.2-201ENST00000457376 180 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 SCARNA13-201ENST00000516672 275 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 SNORA70.24-201ENST00000517233 118 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 MIR5571-201ENST00000577998 113 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 MIR3646-201ENST00000578301 84 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 SNORD84-203ENST00000584275 78 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 U3.45-201ENST00000607547 219 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.01□□□□□ -1.61
RC3H1Q5TC82 AC126323.6-202ENST00000568092 3511 ntBASIC5.01□□□□□ -1.61
RC3H1Q5TC82 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5□□□□□ -1.61
RC3H1Q5TC82 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RC3H1Q5TC82 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RC3H1Q5TC82 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5□□□□□ -1.61
RC3H1Q5TC82 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5□□□□□ -1.61
RC3H1Q5TC82 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RC3H1Q5TC82 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5□□□□□ -1.61
RC3H1Q5TC82 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5□□□□□ -1.61
RC3H1Q5TC82 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RC3H1Q5TC82 RNU1-15P-201ENST00000353977 144 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 Y_RNA.329-201ENST00000365209 107 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 SNORA8.3-201ENST00000384679 139 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 MIR708-201ENST00000390708 88 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 RPS29P4-201ENST00000414733 161 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 AC009963.1-201ENST00000417265 157 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 AC063976.4-201ENST00000421971 163 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 AL139247.1-201ENST00000422768 325 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 AC112220.1-201ENST00000434628 355 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 AC083863.1-201ENST00000438811 231 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5□□□□□ -1.61
RC3H1Q5TC82 RNA5SP54-201ENST00000516951 92 ntBASIC5□□□□□ -1.61
RC3H1Q5TC82 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5□□□□□ -1.61
RC3H1Q5TC82 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RC3H1Q5TC82 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5□□□□□ -1.61
RC3H1Q5TC82 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
RC3H1Q5TC82 AL359693.1-201ENST00000614959 2407 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 DEFB108F-201ENST00000344638 222 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 RNU6-801P-201ENST00000364087 105 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 MIR195-201ENST00000385194 87 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 MIR888-201ENST00000401186 77 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 RPL21P66-201ENST00000426566 466 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 RPL30P12-201ENST00000474666 353 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 MIR3922-201ENST00000585192 84 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 AC013791.1-201ENST00000616619 62 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 MIR6844-201ENST00000637122 62 ntBASIC4.99□□□□□ -1.61
RC3H1Q5TC82 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RC3H1Q5TC82 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 RNU4-10P-201ENST00000364383 140 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 U8.7-201ENST00000364940 136 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 RNU6-407P-201ENST00000365280 104 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 Y_RNA.369-201ENST00000365568 117 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 RNU2-68P-201ENST00000410878 191 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 ELOCP21-201ENST00000412558 336 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 AL158823.1-201ENST00000418441 478 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 AC079780.1-201ENST00000428259 207 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 CKS1BP5-201ENST00000434172 273 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 AL645939.1-201ENST00000453429 797 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.98□□□□□ -1.61
RC3H1Q5TC82 SCARNA8-201ENST00000515924 131 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 RNU6-1256P-201ENST00000516539 103 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 AP004607.1-201ENST00000524456 203 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 RNU1-30P-201ENST00000606575 163 ntBASIC4.98□□□□□ -1.61
RC3H1Q5TC82 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms