Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.84□□□□□ -1.79
CCNFP41002 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCNFP41002 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CCNFP41002 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CCNFP41002 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.8
CCNFP41002 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
CCNFP41002 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCNFP41002 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.83□□□□□ -1.8
CCNFP41002 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCNFP41002 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.83□□□□□ -1.8
CCNFP41002 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCNFP41002 RNU4-90P-201ENST00000362773 141 ntBASIC3.83□□□□□ -1.8
CCNFP41002 Y_RNA.117-201ENST00000363294 101 ntBASIC3.83□□□□□ -1.8
CCNFP41002 U8.10-201ENST00000384260 133 ntBASIC3.83□□□□□ -1.8
CCNFP41002 MIR23B-201ENST00000384832 97 ntBASIC3.83□□□□□ -1.8
CCNFP41002 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCNFP41002 RN7SKP61-201ENST00000410642 295 ntBASIC3.83□□□□□ -1.8
CCNFP41002 AC019205.3-201ENST00000424573 156 ntBASIC3.83□□□□□ -1.8
CCNFP41002 AC005002.2-201ENST00000438228 269 ntBASIC3.83□□□□□ -1.8
CCNFP41002 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCNFP41002 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.83□□□□□ -1.8
CCNFP41002 AC026784.1-201ENST00000507986 352 ntBASIC3.83□□□□□ -1.8
CCNFP41002 RNU6-496P-201ENST00000516145 99 ntBASIC3.83□□□□□ -1.8
CCNFP41002 RNA5SP208-201ENST00000516156 78 ntBASIC3.83□□□□□ -1.8
CCNFP41002 RNU7-110P-201ENST00000516891 62 ntBASIC3.83□□□□□ -1.8
CCNFP41002 CKS1BP7-201ENST00000522230 235 ntBASIC3.83□□□□□ -1.8
CCNFP41002 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCNFP41002 AC021231.3-201ENST00000558497 370 ntBASIC3.83□□□□□ -1.8
CCNFP41002 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.83□□□□□ -1.8
CCNFP41002 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.83□□□□□ -1.8
CCNFP41002 MIR4474-201ENST00000579189 78 ntBASIC3.83□□□□□ -1.8
CCNFP41002 RNA5SP196-201ENST00000625967 102 ntBASIC3.83□□□□□ -1.8
CCNFP41002 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
CCNFP41002 AC007256.1-201ENST00000392253 2765 ntBASIC3.83□□□□□ -1.8
CCNFP41002 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCNFP41002 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCNFP41002 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNFP41002 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCNFP41002 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
CCNFP41002 AC092268.1-201ENST00000342691 405 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RNU6-280P-201ENST00000364145 104 ntBASIC3.82□□□□□ -1.8
CCNFP41002 Y_RNA.269-201ENST00000364685 89 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RNU6-283P-201ENST00000364788 107 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RNU6-21P-201ENST00000384710 107 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RNU6-159P-201ENST00000391080 106 ntBASIC3.82□□□□□ -1.8
CCNFP41002 EI24P2-201ENST00000397776 1076 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AL603908.1-201ENST00000406098 201 ntBASIC3.82□□□□□ -1.8
CCNFP41002 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNFP41002 AC245291.1-201ENST00000419501 328 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AC078809.1-201ENST00000427601 140 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RPS15AP5-201ENST00000436276 388 ntBASIC3.82□□□□□ -1.8
CCNFP41002 HMGN2P20-201ENST00000437531 273 ntBASIC3.82□□□□□ -1.8
CCNFP41002 MTND2P29-201ENST00000438595 412 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNFP41002 RPS29P31-201ENST00000446147 164 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RPL7P47-201ENST00000497299 556 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RAC1P2-201ENST00000511164 579 ntBASIC3.82□□□□□ -1.8
CCNFP41002 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNFP41002 SNORA70.14-201ENST00000516205 110 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RN7SKP49-201ENST00000516675 260 ntBASIC3.82□□□□□ -1.8
CCNFP41002 RNU6-182P-201ENST00000516970 105 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AC130289.1-201ENST00000577321 73 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNFP41002 MIR4286-201ENST00000580651 93 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AC090897.2-201ENST00000581715 130 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AL606490.9-201ENST00000603331 271 ntBASIC3.82□□□□□ -1.8
CCNFP41002 AC009779.6-201ENST00000603972 165 ntBASIC3.82□□□□□ -1.8
CCNFP41002 BX284668.6-201ENST00000606899 438 ntBASIC3.82□□□□□ -1.8
CCNFP41002 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.82□□□□□ -1.8
CCNFP41002 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNFP41002 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCNFP41002 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNFP41002 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNFP41002 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCNFP41002 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNFP41002 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNU6-290P-201ENST00000365212 101 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNU6-281P-201ENST00000384212 103 ntBASIC3.81□□□□□ -1.8
CCNFP41002 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCNFP41002 RNA5SP213-201ENST00000391031 106 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNA5SP252-201ENST00000391131 119 ntBASIC3.81□□□□□ -1.8
CCNFP41002 MIR548I3-201ENST00000408378 149 ntBASIC3.81□□□□□ -1.8
CCNFP41002 MIR548I1-201ENST00000408810 149 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNA5SP390-201ENST00000410191 113 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNU2-49P-201ENST00000410666 184 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNU2-14P-201ENST00000411053 191 ntBASIC3.81□□□□□ -1.8
CCNFP41002 AC138623.1-201ENST00000418060 216 ntBASIC3.81□□□□□ -1.8
CCNFP41002 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNFP41002 PIGPP3-201ENST00000425307 415 ntBASIC3.81□□□□□ -1.8
CCNFP41002 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNFP41002 SUMO1P3-201ENST00000439961 304 ntBASIC3.81□□□□□ -1.8
CCNFP41002 HSPE1P25-201ENST00000455484 251 ntBASIC3.81□□□□□ -1.8
CCNFP41002 AL136097.1-201ENST00000456945 913 ntBASIC3.81□□□□□ -1.8
CCNFP41002 SERF1AP1-201ENST00000514575 187 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNA5SP164-201ENST00000516533 110 ntBASIC3.81□□□□□ -1.8
CCNFP41002 SNORA31.16-201ENST00000516773 139 ntBASIC3.81□□□□□ -1.8
CCNFP41002 RNU6-1198P-201ENST00000516904 67 ntBASIC3.81□□□□□ -1.8
CCNFP41002 AP006245.1-201ENST00000522549 120 ntBASIC3.81□□□□□ -1.8
CCNFP41002 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNFP41002 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms