Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 FTH1P15-201ENST00000406984 280 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-908P-201ENST00000410160 94 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU4-46P-201ENST00000410818 138 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNA5SP111-201ENST00000411386 101 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC010493.1-201ENST00000513479 292 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU5F-8P-201ENST00000515941 111 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 SCARNA11.3-201ENST00000517276 130 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL118558.2-201ENST00000556294 238 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC008121.1-201ENST00000603244 268 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC093788.1-201ENST00000609356 927 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL354950.2-201ENST00000617939 290 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 U6.114-201ENST00000636407 96 ntBASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.8□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU4-20P-201ENST00000365601 151 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 SNORA69-201ENST00000383895 132 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 Y_RNA.399-201ENST00000383955 105 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-38P-201ENST00000384085 107 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-517P-201ENST00000384362 110 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 SNORD70.1-201ENST00000391007 85 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 Y_RNA.595-201ENST00000410403 105 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 CALM1P1-201ENST00000442082 433 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC009296.1-201ENST00000443146 155 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 SCARNA18-201ENST00000459004 134 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU7-63P-201ENST00000459054 62 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-333P-201ENST00000459117 107 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 snoU109.2-201ENST00000459316 135 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-506P-201ENST00000516553 94 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-1178P-201ENST00000516674 107 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU2-44P-201ENST00000516795 194 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 SNORA25.17-201ENST00000517184 124 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL137161.1-201ENST00000532231 390 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 GNAI2P1-201ENST00000541815 315 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC007151.1-201ENST00000572774 483 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC004223.2-201ENST00000590309 544 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL109918.3-201ENST00000603072 338 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC012507.3-201ENST00000603556 477 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC008536.2-201ENST00000607284 349 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL627230.6-201ENST00000611129 280 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 MIR3199-2-201ENST00000636243 86 ntBASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.79□□□□□ -2.12
TMX2-CTNND1H3BSU7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-483P-201ENST00000384088 108 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 MIR10A-201ENST00000385043 110 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU2-40P-201ENST00000410833 196 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 TIMM9P3-201ENST00000428659 274 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 MTND3P21-201ENST00000433774 331 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 OSTCP8-201ENST00000445117 448 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 SRRM1P2-201ENST00000464531 1192 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL121769.1-201ENST00000469473 401 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC087884.1-201ENST00000469738 328 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC023141.11-201ENST00000508864 202 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 MIR892C-201ENST00000516410 77 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 ACA59.2-201ENST00000517061 156 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 HMGB1P33-201ENST00000563485 527 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AP003400.5-201ENST00000624827 617 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 MIR7515-201ENST00000637837 67 ntBASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.78□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC008555.8-201ENST00000623602 2168 ntBASIC1.78□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR378A-201ENST00000362177 66 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms