Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SNORD116-22-201ENST00000384430 92 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 RNA5SP113-201ENST00000410486 84 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 RNU6-402P-201ENST00000410678 103 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 AC004941.2-201ENST00000427009 228 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 AC012671.1-201ENST00000451912 203 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 snoU13.1-201ENST00000459157 104 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 NDUFA4P2-201ENST00000489989 244 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 RNU6-693P-201ENST00000516134 107 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF223E7ERA6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.23□□□□□ -1.73
RNF223E7ERA6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF223E7ERA6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.23□□□□□ -1.73
RNF223E7ERA6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
RNF223E7ERA6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF223E7ERA6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF223E7ERA6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF223E7ERA6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF223E7ERA6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF223E7ERA6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 RNU6-349P-201ENST00000362402 107 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 RNU6-944P-201ENST00000364023 107 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 SNORA7.2-201ENST00000364446 145 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 SNORD32B-201ENST00000364460 84 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 RNU6-1104P-201ENST00000384723 104 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 MIR548A2-201ENST00000384956 97 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 RNA5SP332-201ENST00000391063 115 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 RNU6-938P-201ENST00000411285 103 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 RPL30P4-201ENST00000429309 333 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 RN7SL443P-201ENST00000464331 290 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 AC084357.1-201ENST00000473404 255 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 RPS27P22-201ENST00000478056 241 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 RN7SKP282-201ENST00000516824 299 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 AC109329.2-201ENST00000519658 482 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 TOMM20P2-201ENST00000540082 421 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 PARP1P2-201ENST00000556806 195 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 AL391358.1-201ENST00000605342 190 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 MIR376A2-201ENST00000636782 80 ntBASIC4.22□□□□□ -1.73
RNF223E7ERA6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF223E7ERA6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF223E7ERA6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF223E7ERA6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF223E7ERA6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF223E7ERA6 FAM35CP-201ENST00000554755 2470 ntBASIC4.21□□□□□ -1.73
RNF223E7ERA6 ABCC13-202ENST00000463099 3842 ntBASIC4.21□□□□□ -1.73
RNF223E7ERA6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 SNORD115-13-201ENST00000363358 82 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 SNORA33-201ENST00000363664 130 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 SNORD115-16-201ENST00000363887 82 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 SNORD115-1-201ENST00000364961 82 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 RN7SKP153-201ENST00000365026 316 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 U8.17-201ENST00000391292 132 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 MIR298-201ENST00000401212 88 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 RPL18P10-201ENST00000425606 538 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 Y_RNA.666-201ENST00000516187 112 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 HMGN2P15-201ENST00000585707 270 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 OR56B2P-202ENST00000641377 2453 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 AC010680.1-201ENST00000590024 3590 ntBASIC4.21□□□□□ -1.74
RNF223E7ERA6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF223E7ERA6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF223E7ERA6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms