Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS5Q9UPZ3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
HPS5Q9UPZ3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS5Q9UPZ3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HPS5Q9UPZ3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS5Q9UPZ3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 RNU6-766P-201ENST00000362478 107 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 RNU6-799P-201ENST00000363567 107 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 Y_RNA.346-201ENST00000365385 112 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 Z98749.2-208ENST00000381646 500 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 RNU6-1336P-201ENST00000383886 109 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 RNY3P5-201ENST00000384127 102 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 MIR518D-201ENST00000385014 87 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 AL445584.1-201ENST00000431451 330 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 HSPE1P21-201ENST00000438283 308 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 RNU6-781P-201ENST00000516377 101 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 AC233702.9-201ENST00000581528 203 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 MIR4512-201ENST00000583257 77 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 AL160290.3-201ENST00000604869 165 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 MIR8059-201ENST00000620427 81 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 AC140479.6-201ENST00000633535 357 ntBASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HPS5Q9UPZ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.21□□□□□ -1.57
HPS5Q9UPZ3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.21□□□□□ -1.57
HPS5Q9UPZ3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 AC092268.1-201ENST00000342691 405 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 MIR367-201ENST00000362299 68 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 RNU1-62P-201ENST00000362599 164 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 SNORD56.1-201ENST00000362913 68 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 RNU6-173P-201ENST00000364215 104 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 RNU6-647P-201ENST00000364243 107 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 U6atac.2-201ENST00000408644 118 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 RN7SKP19-201ENST00000516016 252 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 MIR378D2-201ENST00000580636 98 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 AC019159.1-201ENST00000605094 187 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 NOL8P1-201ENST00000508336 3529 ntBASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HPS5Q9UPZ3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AC073073.2-201ENST00000609827 2578 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AC022336.2-201ENST00000568966 2538 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 Y_RNA.310-201ENST00000365063 113 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 Y_RNA.456-201ENST00000384232 111 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 MIR544A-201ENST00000384855 91 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 MIR549A-201ENST00000385268 96 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 RNU6-855P-201ENST00000410395 104 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AC012306.1-201ENST00000423267 114 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 RPS26P47-201ENST00000427219 348 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AC078809.1-201ENST00000427601 140 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AC009237.8-201ENST00000445492 379 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 RPL23AP14-201ENST00000468281 468 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 KC877373.1-201ENST00000479066 408 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 RNU6-412P-201ENST00000516434 106 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 SNORA70.24-201ENST00000517233 118 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 RPL23AP97-201ENST00000568955 471 ntBASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HPS5Q9UPZ3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AL450326.2-201ENST00000421913 1962 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 RNA5SP307-201ENST00000362863 116 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 Y_RNA.281-201ENST00000364774 94 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 Y_RNA.328-201ENST00000365208 113 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 Y_RNA.341-201ENST00000365341 102 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 RNU6-144P-201ENST00000383951 107 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 SNORA74C-2-201ENST00000411179 201 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 CKS1BP5-201ENST00000434172 273 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 HMGN2P32-201ENST00000444648 269 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AL031274.2-201ENST00000599419 203 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AL356575.1-201ENST00000603008 283 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms