Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR95-201ENST00000385072 81 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 RNU6-1328P-201ENST00000410938 106 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 SDHDP6-201ENST00000414693 480 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 RPEP3-201ENST00000425462 676 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 AC109925.1-201ENST00000478069 331 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 IGLV2-34-201ENST00000490007 283 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 AC107393.1-201ENST00000512403 346 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 Y_RNA.662-201ENST00000516028 97 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 RNA5SP392-201ENST00000516905 112 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 MIR4310-201ENST00000582950 57 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.72□□□□□ -1.49
RTN4Q9NQC3 AL356280.1-201ENST00000603614 379 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 AL365265.1-201ENST00000621045 234 ntBASIC5.72□□□□□ -1.49
RTN4Q9NQC3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.72□□□□□ -1.49
RTN4Q9NQC3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RTN4Q9NQC3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RTN4Q9NQC3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTN4Q9NQC3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
RTN4Q9NQC3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.71□□□□□ -1.49
RTN4Q9NQC3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC5.71□□□□□ -1.5
RTN4Q9NQC3 AC008134.1-201ENST00000420943 193 ntBASIC5.71□□□□□ -1.5
RTN4Q9NQC3 MIR1273E-201ENST00000581165 102 ntBASIC5.71□□□□□ -1.5
RTN4Q9NQC3 U6.106-201ENST00000636360 105 ntBASIC5.71□□□□□ -1.5
RTN4Q9NQC3 MIR1910-201ENST00000636955 80 ntBASIC5.71□□□□□ -1.5
RTN4Q9NQC3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.71□□□□□ -1.5
RTN4Q9NQC3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTN4Q9NQC3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 RNA5SP234-201ENST00000363916 119 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 Y_RNA.368-201ENST00000365547 113 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 SNORD21-201ENST00000383953 95 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 MIR93-201ENST00000385024 80 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 RN7SL459P-201ENST00000481078 302 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 SNORA48.11-201ENST00000517015 89 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 MIR4505-201ENST00000582238 73 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 AC140113.4-201ENST00000622087 222 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 MAPK10-263ENST00000641052 4307 ntBASIC5.7□□□□□ -1.5
RTN4Q9NQC3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTN4Q9NQC3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 RNA5SP335-201ENST00000363817 110 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 Y_RNA.233-201ENST00000364407 101 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 AC068538.1-201ENST00000376856 336 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 COX6CP10-201ENST00000416832 224 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 AC016925.1-201ENST00000458303 298 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 RNU6-221P-201ENST00000459541 99 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 MIR449C-201ENST00000516047 92 ntBASIC5.69□□□□□ -1.5
RTN4Q9NQC3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
RTN4Q9NQC3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 RNA5SP90-201ENST00000364801 99 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 MIR873-201ENST00000401120 77 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 MIR1289-1-201ENST00000408836 144 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 RNU6-855P-201ENST00000410395 104 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 RN7SKP213-201ENST00000410746 298 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 OOSP1P1-201ENST00000423265 274 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 MIR7154-201ENST00000620673 73 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 AC006435.5-201ENST00000624486 112 ntBASIC5.68□□□□□ -1.5
RTN4Q9NQC3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.68□□□□□ -1.5
RTN4Q9NQC3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTN4Q9NQC3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTN4Q9NQC3 RNA5SP388-201ENST00000362584 119 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 Y_RNA.308-201ENST00000365043 101 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 Y_RNA.341-201ENST00000365341 102 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AL159169.1-201ENST00000421119 127 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AC064862.4-201ENST00000442180 334 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 EEF1B2P7-201ENST00000451177 676 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AC010598.1-201ENST00000510378 103 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 SNORD46.2-201ENST00000516021 102 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AC087441.2-201ENST00000529141 262 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.67□□□□□ -1.5
RTN4Q9NQC3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AL133393.1-201ENST00000603277 287 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AL008718.3-201ENST00000610217 321 ntBASIC5.67□□□□□ -1.5
RTN4Q9NQC3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms