Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 U3.45-201ENST00000607547 219 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC240442.1-201ENST00000616055 283 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC012314.7-201ENST00000619693 93 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 U6.105-201ENST00000637379 88 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 Y_RNA.83-201ENST00000363005 113 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 RNU6-926P-201ENST00000384075 107 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 MIR218-2-201ENST00000385006 110 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 SNORD58.1-201ENST00000391313 66 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 RNU6-493P-201ENST00000391321 108 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 Y_RNA.644-201ENST00000459006 113 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 RPL7P47-201ENST00000497299 556 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 Y_RNA.674-201ENST00000516362 113 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 MIR4659A-201ENST00000580269 81 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 AL645944.1-201ENST00000603857 493 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 AC127459.3-201ENST00000624328 466 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 AP000553.6-201ENST00000641242 118 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.8□□□□□ -1.8
RNF38Q9H0F5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF38Q9H0F5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 RNU6-270P-201ENST00000364131 105 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 RNU6-746P-201ENST00000384112 109 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AL078601.1-201ENST00000444542 271 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AL392103.1-201ENST00000447000 198 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 SNORD105B-201ENST00000458770 79 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AC024405.2-202ENST00000532731 184 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 MRPS36P4-201ENST00000534436 298 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AC060766.3-201ENST00000591442 263 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 U2.14-201ENST00000615943 113 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AC006111.3-201ENST00000622137 383 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 AC097372.5-201ENST00000623665 376 ntBASIC3.79□□□□□ -1.8
RNF38Q9H0F5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF38Q9H0F5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 RNU6-545P-201ENST00000362681 104 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 RNU6-78P-201ENST00000362897 107 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 Y_RNA.199-201ENST00000364014 102 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 MIR490-201ENST00000384865 128 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 SNORD78.2-201ENST00000391076 69 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 RNA5SP38-201ENST00000410750 119 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 DBIP2-201ENST00000419076 262 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 CYCSP4-201ENST00000429682 331 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 RNU6-255P-201ENST00000516957 105 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 SNORA31.18-201ENST00000517043 134 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AC010186.2-204ENST00000537668 439 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AC090617.3-201ENST00000573670 475 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AL138880.2-201ENST00000616214 239 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 AC073308.1-201ENST00000623696 305 ntBASIC3.78□□□□□ -1.8
RNF38Q9H0F5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF38Q9H0F5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 BTF3L4P2-201ENST00000392798 346 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC099548.1-201ENST00000421443 426 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 RPS26P21-201ENST00000475397 348 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 RPS23P5-201ENST00000495419 428 ntBASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF38Q9H0F5 AC026784.1-201ENST00000507986 352 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms