Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 AC009237.8-201ENST00000445492 379 ntBASIC5.34□□□□□ -1.55
NBPF3Q9H094 AC109327.2-201ENST00000448339 378 ntBASIC5.34□□□□□ -1.55
NBPF3Q9H094 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NBPF3Q9H094 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NBPF3Q9H094 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 RNU6-107P-201ENST00000516643 102 ntBASIC5.34□□□□□ -1.55
NBPF3Q9H094 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 MIR378D2-201ENST00000580636 98 ntBASIC5.34□□□□□ -1.55
NBPF3Q9H094 RPL30P11-203ENST00000598995 310 ntBASIC5.34□□□□□ -1.55
NBPF3Q9H094 AL359198.2-201ENST00000611836 194 ntBASIC5.34□□□□□ -1.55
NBPF3Q9H094 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.34□□□□□ -1.55
NBPF3Q9H094 SCN1A-220ENST00000641603 12506 ntBASIC5.34□□□□□ -1.56
NBPF3Q9H094 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NBPF3Q9H094 AL359693.1-201ENST00000614959 2407 ntBASIC5.34□□□□□ -1.56
NBPF3Q9H094 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NBPF3Q9H094 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
NBPF3Q9H094 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NBPF3Q9H094 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NBPF3Q9H094 RNU6-508P-201ENST00000363231 103 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 RNU6-647P-201ENST00000364243 107 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 RNA5SP171-201ENST00000391071 115 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 RPL23AP48-201ENST00000406913 488 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 RNU6-710P-201ENST00000410424 105 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.33□□□□□ -1.56
NBPF3Q9H094 CKS1BP5-201ENST00000434172 273 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 AC093331.1-201ENST00000521474 169 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 AL161713.1-201ENST00000555538 145 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 AC021231.3-201ENST00000558497 370 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 AC019159.1-201ENST00000605094 187 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC5.33□□□□□ -1.56
NBPF3Q9H094 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NBPF3Q9H094 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.33□□□□□ -1.56
NBPF3Q9H094 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NBPF3Q9H094 AC006971.1-201ENST00000407916 4486 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 AL592437.2-201ENST00000421655 2434 ntBASIC5.33□□□□□ -1.56
NBPF3Q9H094 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.32□□□□□ -1.56
NBPF3Q9H094 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NBPF3Q9H094 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NBPF3Q9H094 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.32□□□□□ -1.56
NBPF3Q9H094 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NBPF3Q9H094 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.32□□□□□ -1.56
NBPF3Q9H094 RNU6-1141P-201ENST00000364520 107 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 RNU6-1264P-201ENST00000383891 107 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 Y_RNA.415-201ENST00000384012 112 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 SDHCP2-201ENST00000398565 501 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 RN7SKP61-201ENST00000410642 295 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NBPF3Q9H094 AC006445.2-201ENST00000510061 472 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 RNU6-412P-201ENST00000516434 106 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 MRPL49P2-201ENST00000521066 465 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 PRELID2P1-201ENST00000552837 301 ntBASIC5.32□□□□□ -1.56
NBPF3Q9H094 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.32□□□□□ -1.56
NBPF3Q9H094 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NBPF3Q9H094 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
NBPF3Q9H094 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NBPF3Q9H094 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NBPF3Q9H094 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NBPF3Q9H094 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NBPF3Q9H094 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NBPF3Q9H094 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 Y_RNA.281-201ENST00000364774 94 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 Y_RNA.310-201ENST00000365063 113 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 RNU1-63P-201ENST00000383902 164 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 MIR518D-201ENST00000385014 87 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 AL356387.2-201ENST00000422272 243 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 AC012306.1-201ENST00000423267 114 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 AL356867.1-201ENST00000429623 299 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 AC006517.1-201ENST00000480485 328 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 RN7SKP46-201ENST00000515942 234 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 Y_RNA.690-201ENST00000516603 95 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 AC006130.2-201ENST00000586202 326 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 AC091979.2-201ENST00000607514 214 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 MTND5P18-201ENST00000445624 1801 ntBASIC5.31□□□□□ -1.56
NBPF3Q9H094 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NBPF3Q9H094 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
NBPF3Q9H094 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NBPF3Q9H094 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NBPF3Q9H094 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NBPF3Q9H094 AL133383.2-201ENST00000622958 2336 ntBASIC5.3□□□□□ -1.56
NBPF3Q9H094 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.3□□□□□ -1.56
NBPF3Q9H094 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NBPF3Q9H094 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms