Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
USB1Q9BQ65 MIR586-201ENST00000385035 97 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 AL121890.1-201ENST00000435457 205 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 SNORD19.2-201ENST00000516978 73 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC040958.1-201ENST00000561102 201 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC005972.2-201ENST00000604690 348 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC106754.2-201ENST00000623006 233 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC091905.4-201ENST00000623432 202 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USB1Q9BQ65 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
USB1Q9BQ65 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
USB1Q9BQ65 USP8P1-201ENST00000494673 3183 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC007256.1-201ENST00000392253 2765 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 RNA5SP28-201ENST00000363841 119 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 MIR589-201ENST00000385238 99 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 MIR550A3-201ENST00000390735 95 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 AL355796.1-201ENST00000406706 323 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 U6atac.2-201ENST00000408644 118 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 RPL19P16-201ENST00000433839 588 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 AL354714.3-201ENST00000447284 493 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 RPL36AP21-201ENST00000490372 323 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 AL138880.2-201ENST00000616214 239 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 AC069528.2-201ENST00000624849 1991 ntBASIC4.52□□□□□ -1.69
USB1Q9BQ65 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USB1Q9BQ65 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USB1Q9BQ65 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USB1Q9BQ65 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
USB1Q9BQ65 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
USB1Q9BQ65 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USB1Q9BQ65 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
USB1Q9BQ65 RNU6-309P-201ENST00000364573 106 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 RNU1-106P-201ENST00000384382 164 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 COX5BP7-201ENST00000414780 274 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 RPL36AP10-201ENST00000421785 322 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC008953.1-201ENST00000497334 318 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.51□□□□□ -1.69
USB1Q9BQ65 COX6B1P5-201ENST00000509843 249 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC006445.2-201ENST00000510061 472 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC005921.1-201ENST00000510589 286 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 BNIP3P1-201ENST00000547295 580 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC012493.2-201ENST00000595083 291 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 AL049861.1-201ENST00000603130 150 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.51□□□□□ -1.69
USB1Q9BQ65 AL021707.8-201ENST00000609428 183 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC025166.1-201ENST00000612411 163 ntBASIC4.51□□□□□ -1.69
USB1Q9BQ65 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USB1Q9BQ65 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USB1Q9BQ65 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USB1Q9BQ65 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USB1Q9BQ65 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
USB1Q9BQ65 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USB1Q9BQ65 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 RNU6-1210P-201ENST00000363775 107 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 SNORD73B-201ENST00000364394 72 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 RNA5SP189-201ENST00000364920 115 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 MIRLET7F2-201ENST00000385277 83 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 AC023141.4-201ENST00000412031 328 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 SCARNA10-201ENST00000459255 330 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 RN7SL443P-201ENST00000464331 290 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 AC026241.1-201ENST00000517873 2142 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 RMST_8.1-201ENST00000610287 165 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 FAM27D1-201ENST00000612308 341 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 MIR6839-201ENST00000620425 113 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USB1Q9BQ65 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms