Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AL590556.1-201ENST00000423231 483 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 UBE2D3P3-201ENST00000426992 425 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 RPL31P3-201ENST00000458430 332 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC009646.1-201ENST00000510455 318 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 CYCSP23-201ENST00000519781 313 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AL136520.1-202ENST00000555494 763 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC090578.1-201ENST00000604955 591 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC006270.3-201ENST00000605967 1036 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 7SK.13-201ENST00000622040 250 ntBASIC0.67□□□□□ -2.3
LYSMD1Q96S90 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.67□□□□□ -2.3
LYSMD1Q96S90 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 Y_RNA.33-201ENST00000362591 102 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 RNU5B-4P-201ENST00000363508 111 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 Y_RNA.332-201ENST00000365271 113 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 SNORA4.3-201ENST00000365564 137 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 RNU6-278P-201ENST00000390945 109 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AL359704.1-201ENST00000411586 781 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AL953862.1-201ENST00000423016 168 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AC013262.1-201ENST00000426710 252 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AP000542.1-201ENST00000448473 371 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 snoU109.2-201ENST00000459316 135 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 ACA64.5-201ENST00000516207 127 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 RNU5A-4P-201ENST00000516588 111 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 RNA5SP481-201ENST00000516814 122 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 RNA5SP437-201ENST00000517249 129 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 MIR1273C-201ENST00000578669 77 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AP002802.2-201ENST00000605877 235 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AC008945.2-201ENST00000606056 604 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 MTND5P42-201ENST00000637720 498 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 AC006927.2-201ENST00000639256 389 ntBASIC0.66□□□□□ -2.3
LYSMD1Q96S90 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
LYSMD1Q96S90 SNORD116-20-201ENST00000384529 92 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 MIR518E-201ENST00000385252 88 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 PIGFP2-201ENST00000421400 651 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AL365338.1-201ENST00000422282 858 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 ZNF886P-201ENST00000450781 723 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AL583843.1-201ENST00000456070 346 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 MTND1P3-201ENST00000484956 952 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC026616.1-201ENST00000523157 525 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 DEFB130C-202ENST00000530001 230 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 DEFB108A-201ENST00000530110 222 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AL391001.1-201ENST00000602747 715 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AC005776.1-201ENST00000603164 290 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 OR4G3P-201ENST00000633500 913 ntBASIC0.65□□□□□ -2.31
LYSMD1Q96S90 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LYSMD1Q96S90 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.64□□□□□ -2.31
LYSMD1Q96S90 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.64□□□□□ -2.31
LYSMD1Q96S90 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 RNU6-395P-201ENST00000365662 106 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 RNY1P14-201ENST00000384426 108 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
LYSMD1Q96S90 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 MTCO1P17-201ENST00000411522 491 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AL591212.2-201ENST00000433923 257 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 HMGN2P9-201ENST00000476875 229 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.64□□□□□ -2.31
LYSMD1Q96S90 RNU6-914P-201ENST00000516749 109 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 SNORD60.2-201ENST00000516883 86 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 RNU6-1223P-201ENST00000517124 104 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 SUMO2P18-201ENST00000518873 252 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AL078603.1-201ENST00000603824 313 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AC069114.2-201ENST00000604699 304 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AL365434.2-201ENST00000607979 234 ntBASIC0.64□□□□□ -2.31
LYSMD1Q96S90 AL159153.1-201ENST00000619688 317 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms