Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 RSL24D1P8-201ENST00000434442 492 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC079395.1-201ENST00000510981 262 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 RNU7-40P-201ENST00000516397 64 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 RNU6-1028P-201ENST00000517164 93 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AP003355.1-201ENST00000518956 587 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 MTND5P33-201ENST00000571250 1450 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
ALPK3Q96L96 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ALPK3Q96L96 snoU2_19.1-201ENST00000362361 80 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AL359634.1-202ENST00000404721 284 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 Y_RNA.597-201ENST00000410463 100 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 RNU2-70P-201ENST00000410718 179 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AL135790.2-201ENST00000437701 267 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 MTCO2P25-201ENST00000447065 681 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 RPL39P36-201ENST00000490784 156 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 RNU6-667P-201ENST00000517186 102 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 Z69720.2-201ENST00000624755 279 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC099654.9-201ENST00000637055 678 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC006927.2-201ENST00000639256 389 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 RNU6-512P-201ENST00000364438 103 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 RNU6-35P-201ENST00000384530 107 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 MIR19A-201ENST00000384878 82 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 RNU2-62P-201ENST00000410868 191 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC083875.1-201ENST00000419509 405 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC245047.4-201ENST00000433189 144 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.69□□□□□ -2.3
ALPK3Q96L96 RNA5SP216-201ENST00000516111 123 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 RNY4P37-201ENST00000516225 96 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 RNU6-1315P-201ENST00000517187 99 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC012414.6-201ENST00000568241 401 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 MIR1273C-201ENST00000578669 77 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC092574.1-201ENST00000609771 420 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC013470.4-201ENST00000619978 986 ntBASIC0.69□□□□□ -2.3
ALPK3Q96L96 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.69□□□□□ -2.3
ALPK3Q96L96 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.69□□□□□ -2.3
ALPK3Q96L96 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ALPK3Q96L96 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
ALPK3Q96L96 RNU6-1010P-201ENST00000362757 107 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU1-124P-201ENST00000363861 145 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU6-1187P-201ENST00000364771 110 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 MIR29B2-201ENST00000385055 81 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 CBX3P9-201ENST00000402326 552 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL357139.1-201ENST00000407792 426 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU2-36P-201ENST00000410361 191 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 MTCO1P17-201ENST00000411522 491 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RPS15AP10-201ENST00000432472 382 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.68□□□□□ -2.3
ALPK3Q96L96 MTND4P15-201ENST00000437913 1033 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL035666.1-201ENST00000446195 348 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 snoU13.9-201ENST00000458927 103 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC104563.1-201ENST00000476147 376 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU5F-2P-201ENST00000516066 82 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 Y_RNA.689-201ENST00000516589 107 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AP003034.1-201ENST00000534621 422 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC023932.2-201ENST00000603176 175 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 MTATP6P2-201ENST00000603319 678 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.68□□□□□ -2.3
ALPK3Q96L96 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ALPK3Q96L96 LINC02555-201ENST00000563933 1951 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU6-271P-201ENST00000363858 105 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL603865.2-201ENST00000401679 213 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL133475.1-201ENST00000404414 305 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.68□□□□□ -2.3
ALPK3Q96L96 BTF3L4P1-201ENST00000413813 468 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 MTND4P3-201ENST00000417829 541 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL953862.1-201ENST00000423016 168 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL353752.1-201ENST00000454946 260 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 MTCO3P27-201ENST00000514397 196 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC026616.1-201ENST00000523157 525 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC090115.3-201ENST00000553218 849 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 VN1R87P-201ENST00000596706 487 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC005776.1-201ENST00000603164 290 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AL365204.3-201ENST00000612448 685 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC130454.1-201ENST00000622948 401 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 AC093648.1-201ENST00000623546 606 ntBASIC0.68□□□□□ -2.3
ALPK3Q96L96 RNU6-609P-201ENST00000365459 107 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 RNU4-22P-201ENST00000411058 166 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 UBE2V1P10-201ENST00000414685 269 ntBASIC0.67□□□□□ -2.3
ALPK3Q96L96 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.67□□□□□ -2.3
ALPK3Q96L96 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms