Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SNORD108-201ENST00000459332 71 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 RPS17P2-201ENST00000461663 408 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 MRPS36P2-201ENST00000512569 299 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 RNU6-113P-201ENST00000516653 101 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 AL365205.2-201ENST00000594586 68 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 AC093732.2-201ENST00000607950 274 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 Pinc.1-201ENST00000616452 154 ntBASIC5.07□□□□□ -1.6
PTCD2Q8WV60 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PTCD2Q8WV60 AC025031.4-201ENST00000621248 3271 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 SNORA73.1-201ENST00000363107 205 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 AL645733.1-201ENST00000402250 217 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 RBMY2UP-201ENST00000453474 324 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 RPS3P1-201ENST00000456781 192 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 AL441985.1-201ENST00000457727 251 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 snoU13.14-201ENST00000459372 104 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 ENPP7P9-201ENST00000514456 627 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 RNU6-63P-201ENST00000516690 95 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 RNU6-928P-201ENST00000516876 104 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 AC024220.1-201ENST00000603675 484 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 Mico1.1-201ENST00000611698 204 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 MALAT1.1-201ENST00000618249 95 ntBASIC5.06□□□□□ -1.6
PTCD2Q8WV60 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD2Q8WV60 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 AL672167.1-204ENST00000641875 3017 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 RNU6-1010P-201ENST00000362757 107 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 Y_RNA.111-201ENST00000363248 100 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 MIR550A3-201ENST00000390735 95 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 Z98745.1-201ENST00000402553 494 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 AL691482.1-201ENST00000453255 87 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 AC084357.1-201ENST00000473404 255 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 RN7SL97P-201ENST00000486780 299 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 AC078817.1-201ENST00000492623 435 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 MIR4646-201ENST00000580775 63 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 RPL17P51-201ENST00000605218 238 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 AL590808.1-201ENST00000618696 141 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.05□□□□□ -1.6
PTCD2Q8WV60 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCD2Q8WV60 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 SNORA51.4-201ENST00000364993 124 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 AC010598.1-201ENST00000510378 103 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 RNA5SP20-201ENST00000515976 84 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 RNU6-158P-201ENST00000517104 100 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 MIR4662B-201ENST00000579498 81 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 HSPE1P7-201ENST00000604681 321 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 AC087385.3-201ENST00000620477 187 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PTCD2Q8WV60 AP001273.1-201ENST00000624493 3152 ntBASIC5.04□□□□□ -1.6
PTCD2Q8WV60 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PTCD2Q8WV60 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms