Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL390729.2-201ENST00000416137 156 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 MRPS10P1-201ENST00000448483 130 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RPL23AP3-201ENST00000453844 468 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 AP000705.1-201ENST00000454567 350 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.638-201ENST00000459374 113 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 AP001025.1-201ENST00000486139 332 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 AC016632.1-201ENST00000503994 196 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 SNORA40.9-201ENST00000515895 93 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RNU6-1278P-201ENST00000516130 107 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RNA5SP315-201ENST00000516340 116 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 SNORA27.4-201ENST00000516650 95 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RNA5SP309-201ENST00000516670 106 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RNA5SP312-201ENST00000517068 116 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 AL451007.1-201ENST00000595491 289 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 AL357075.2-201ENST00000614906 189 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 RNU6-858P-201ENST00000362436 107 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 SNORA31-201ENST00000362607 130 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 RNU6-514P-201ENST00000384208 107 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 RNU6-1289P-201ENST00000384431 106 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 RNU6-918P-201ENST00000391219 106 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AL358075.3-201ENST00000426289 226 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 SNORD2.1-201ENST00000458762 69 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 snoU13.6-201ENST00000458785 104 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.679-201ENST00000516416 91 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 RPL21P9-201ENST00000556149 474 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AL138963.2-201ENST00000605137 226 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 MIR6500-201ENST00000622700 86 ntBASIC3.63□□□□□ -1.83
NUP43Q8NFH3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP43Q8NFH3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 SPRR2C-201ENST00000290702 219 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RNY1P5-201ENST00000383890 115 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RPL21P17-201ENST00000397467 475 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RPL19P1-201ENST00000411635 428 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 AL162151.2-201ENST00000448875 158 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RPL21P104-201ENST00000464143 478 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RPS29P20-201ENST00000489592 171 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 RNU6-1198P-201ENST00000516904 67 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 CKS1BP7-201ENST00000522230 235 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 MIR3690-201ENST00000580266 75 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 AC006130.2-201ENST00000586202 326 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 MZT1P2-201ENST00000604387 248 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 U6.106-201ENST00000636360 105 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 AC007656.2-201ENST00000624902 4547 ntBASIC3.62□□□□□ -1.83
NUP43Q8NFH3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
NUP43Q8NFH3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 RNU6-873P-201ENST00000363833 107 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.233-201ENST00000364407 101 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.240-201ENST00000364469 95 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms