Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AC000403.1-201ENST00000613696 3585 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 SNORD115-30-201ENST00000364117 82 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 Y_RNA.243-201ENST00000364481 109 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-449P-201ENST00000383914 107 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-763P-201ENST00000390865 106 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 RPL7AP25-201ENST00000423357 805 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AC145146.1-201ENST00000496370 254 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 RNA5SP43-201ENST00000516559 110 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AC209154.1-201ENST00000582156 337 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 MIR5006-201ENST00000583027 110 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AL121932.1-201ENST00000605542 214 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AC015813.4-201ENST00000610469 179 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AP000346.3-201ENST00000622821 210 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 AC069528.2-201ENST00000624849 1991 ntBASIC4.34□□□□□ -1.71
DEPDC4Q8N2C3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
DEPDC4Q8N2C3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 RNU4-84P-201ENST00000364200 139 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.343-201ENST00000365354 112 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 SNORD116-18-201ENST00000383961 92 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 RNA5SP504-201ENST00000410676 117 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 AL590139.1-201ENST00000416267 400 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 AL365496.1-201ENST00000426885 215 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 Z75741.1-201ENST00000446793 314 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 VWA8P1-201ENST00000510889 176 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 DEFB131C-201ENST00000528817 165 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 AC100770.1-201ENST00000532310 322 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 AC079598.5-201ENST00000547460 117 ntBASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
DEPDC4Q8N2C3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 RNA5SP502-201ENST00000362694 119 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U3.8-201ENST00000363675 217 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 RNVU1-6-201ENST00000364688 164 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.357-201ENST00000365487 109 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.400-201ENST00000383963 111 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.412-201ENST00000384001 104 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 RNA5SP87-201ENST00000384155 118 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AL031003.1-201ENST00000404229 172 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 RNU2-2P-201ENST00000410396 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 RPL34P20-201ENST00000442771 351 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 SNORA31.21-201ENST00000517180 77 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 RNU2-4P-201ENST00000606190 192 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.15-201ENST00000611544 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.16-201ENST00000613119 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.12-201ENST00000613778 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.9-201ENST00000615427 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.11-201ENST00000616345 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AC084757.4-201ENST00000616350 526 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.2-201ENST00000616535 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AC006133.1-201ENST00000617106 264 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.3-201ENST00000617785 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.19-201ENST00000618602 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 RNU2-1-201ENST00000618664 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.6-201ENST00000619225 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.5-201ENST00000619465 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 U2.10-201ENST00000620268 191 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 MIR7154-201ENST00000620673 73 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AC008873.1-201ENST00000625051 138 ntBASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
DEPDC4Q8N2C3 AL136164.4-201ENST00000625013 2135 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms