Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX5Q8N196 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SIX5Q8N196 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX5Q8N196 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SIX5Q8N196 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX5Q8N196 SNORA63.1-201ENST00000362493 131 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 Y_RNA.217-201ENST00000364214 105 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 SNORA18.3-201ENST00000384122 132 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 MIR613-201ENST00000385248 95 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 RNA5SP475-201ENST00000410568 110 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 AL445584.1-201ENST00000431451 330 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX5Q8N196 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX5Q8N196 Y_RNA.641-201ENST00000459414 105 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 MRPS18CP4-201ENST00000535821 231 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 MIR3923-201ENST00000579521 83 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 MIR3145-201ENST00000580727 82 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 AC006380.1-201ENST00000603598 186 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 AL161756.2-201ENST00000604597 246 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 AC002076.2-201ENST00000617362 122 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 AL672167.1-203ENST00000641299 2975 ntBASIC4.47□□□□□ -1.69
SIX5Q8N196 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SIX5Q8N196 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SIX5Q8N196 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX5Q8N196 AL133383.2-201ENST00000622958 2336 ntBASIC4.46□□□□□ -1.69
SIX5Q8N196 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
SIX5Q8N196 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SIX5Q8N196 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.46□□□□□ -1.69
SIX5Q8N196 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
SIX5Q8N196 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX5Q8N196 Y_RNA.101-201ENST00000363154 102 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 Y_RNA.435-201ENST00000384095 112 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 RNU6-804P-201ENST00000384286 107 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 MIR449B-201ENST00000384995 97 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 HSPE1P26-201ENST00000405341 275 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 RNU2-37P-201ENST00000410695 177 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 RPS15AP5-201ENST00000436276 388 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 AL353748.1-201ENST00000440753 474 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 HMGN2P16-201ENST00000456802 261 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 RNU7-200P-201ENST00000516105 62 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 RNU6-191P-201ENST00000516295 94 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 RNA5SP519-201ENST00000516480 119 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 MIR3144-201ENST00000579460 79 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 MIR6891-201ENST00000618788 93 ntBASIC4.46□□□□□ -1.7
SIX5Q8N196 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX5Q8N196 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.46□□□□□ -1.7
SIX5Q8N196 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX5Q8N196 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX5Q8N196 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.46□□□□□ -1.7
SIX5Q8N196 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX5Q8N196 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX5Q8N196 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX5Q8N196 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX5Q8N196 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX5Q8N196 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX5Q8N196 RNU1-62P-201ENST00000362599 164 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 RNU6-799P-201ENST00000363567 107 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 RNU6-748P-201ENST00000384648 107 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 MTATP6P29-201ENST00000415057 132 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 CYCSP48-201ENST00000417124 323 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AC004552.1-201ENST00000419089 348 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AL133547.1-201ENST00000448546 220 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 PRSS3P4-201ENST00000453323 162 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 RPS26P3-201ENST00000470205 348 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AC090543.2-201ENST00000483963 348 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AC004057.1-201ENST00000485827 348 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AC026726.1-201ENST00000512859 601 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX5Q8N196 RNA5SP249-201ENST00000516127 99 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 RNU6-1219P-201ENST00000516143 112 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 SNORD19.2-201ENST00000516978 73 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX5Q8N196 AC027176.1-201ENST00000560204 514 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 MIR548AI-201ENST00000579940 88 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AL034555.1-201ENST00000604816 211 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX5Q8N196 AL365265.1-201ENST00000621045 234 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SIX5Q8N196 MIR3674-201ENST00000636576 68 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX5Q8N196 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX5Q8N196 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.45□□□□□ -1.7
SIX5Q8N196 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SIX5Q8N196 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX5Q8N196 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX5Q8N196 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX5Q8N196 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SIX5Q8N196 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX5Q8N196 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX5Q8N196 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX5Q8N196 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX5Q8N196 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX5Q8N196 Y_RNA.291-201ENST00000364886 113 ntBASIC4.44□□□□□ -1.7
SIX5Q8N196 RNU6-211P-201ENST00000384047 107 ntBASIC4.44□□□□□ -1.7
SIX5Q8N196 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX5Q8N196 SNORA11.2-201ENST00000408318 127 ntBASIC4.44□□□□□ -1.7
SIX5Q8N196 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX5Q8N196 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX5Q8N196 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX5Q8N196 RNU6-346P-201ENST00000516288 111 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms