Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 U3.45-201ENST00000607547 219 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AC091903.1-201ENST00000624322 454 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AC009093.8-201ENST00000641769 292 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 LINC02555-201ENST00000563933 1951 ntBASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM48Q8IWZ4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.416-201ENST00000384014 113 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 MIR218-2-201ENST00000385006 110 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 MIR153-2-201ENST00000385225 87 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 RNA5SP171-201ENST00000391071 115 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AL591034.1-201ENST00000407447 340 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 BPY2DP-201ENST00000422208 265 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AC139712.2-201ENST00000424302 339 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 HMGN2P31-201ENST00000432430 273 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 MTND5P15-201ENST00000434246 349 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 MED28P2-201ENST00000475771 317 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 RN7SKP209-201ENST00000516888 304 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AC011602.1-201ENST00000546484 331 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 MIR4644-201ENST00000579929 84 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 HMGN2P15-201ENST00000585707 270 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 RNU1-30P-201ENST00000606575 163 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 AL450472.1-202ENST00000637286 180 ntBASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM48Q8IWZ4 CUL1P1-201ENST00000509510 2425 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AL353743.1-202ENST00000431724 1695 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 RNA5SP361-201ENST00000362686 118 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.54-201ENST00000362766 105 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.478-201ENST00000384358 107 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.539-201ENST00000384635 107 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.541-201ENST00000384640 113 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 RPL23AP95-201ENST00000426806 265 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 EIF1P2-201ENST00000428233 350 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 YME1L1P1-201ENST00000429435 297 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 WARS2P1-201ENST00000429678 537 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC004383.1-201ENST00000438135 289 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 GPM6BP3-201ENST00000442797 145 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AL139109.1-201ENST00000455491 297 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 SNRPGP5-201ENST00000456003 220 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 snoU13.28-201ENST00000459235 104 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 RPL30P12-201ENST00000474666 353 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 RPS4XP22-201ENST00000480755 780 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 RNU1-61P-201ENST00000516107 151 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 UBL5P4-201ENST00000562584 236 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC009163.5-201ENST00000575421 637 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 AC048347.1-201ENST00000624621 427 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 MFSD8-236ENST00000641509 4050 ntBASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM48Q8IWZ4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AL079305.1-201ENST00000623159 3008 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms