Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 SNORA11.4-201ENST00000408823 129 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 RNU4-53P-201ENST00000410828 140 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 RNU6-293P-201ENST00000411259 106 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AL135786.1-201ENST00000415892 214 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.81□□□□□ -2.12
RAB40BQ12829 USP9YP18-201ENST00000425912 695 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AL451074.3-201ENST00000437709 472 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
RAB40BQ12829 AL137159.1-201ENST00000452808 512 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 RPS27P21-201ENST00000486977 252 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 HMGB1P35-201ENST00000503360 598 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB40BQ12829 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.81□□□□□ -2.12
RAB40BQ12829 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40BQ12829 AC008413.1-201ENST00000511864 177 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40BQ12829 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
RAB40BQ12829 SNORA25.17-201ENST00000517184 124 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AC022880.1-201ENST00000534017 973 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AL512310.1-201ENST00000548639 172 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 HIF1AP1-201ENST00000553642 175 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AGGF1P4-201ENST00000568249 801 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 MIR5583-1-201ENST00000580941 59 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AC004223.2-201ENST00000590309 544 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 AC078899.2-201ENST00000595282 212 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 SNRPGP17-201ENST00000603780 214 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RAB40BQ12829 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
RAB40BQ12829 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RAB40BQ12829 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.8□□□□□ -2.12
RAB40BQ12829 RNU6-428P-201ENST00000362942 107 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 RNU6-336P-201ENST00000364891 107 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 RNU6-996P-201ENST00000365438 107 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 SNORD116-9-201ENST00000384000 95 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 SNORD116-3-201ENST00000384287 95 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 SNORD116-7-201ENST00000384404 95 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 SNORD116-5-201ENST00000384462 95 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 RNU2-40P-201ENST00000410833 196 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AL590556.1-201ENST00000423231 483 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 MTCO2P19-201ENST00000427513 598 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.8□□□□□ -2.12
RAB40BQ12829 RPS15AP10-201ENST00000432472 382 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.8□□□□□ -2.12
RAB40BQ12829 AC243964.1-201ENST00000441814 261 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 PSPHP1-201ENST00000450062 261 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AL031274.1-201ENST00000450334 232 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.8□□□□□ -2.12
RAB40BQ12829 SNRPGP7-201ENST00000469016 106 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 HMGB1P29-201ENST00000505659 499 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
RAB40BQ12829 AC115990.1-201ENST00000526957 301 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 CYCSP27-201ENST00000527643 293 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AC022616.8-201ENST00000533569 253 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 MTCO3P23-201ENST00000561363 289 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 MIR3611-201ENST00000584484 83 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AC107304.1-201ENST00000604229 296 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.8□□□□□ -2.12
RAB40BQ12829 U2.17-201ENST00000611454 95 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 AC009509.4-201ENST00000619202 509 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RAB40BQ12829 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RAB40BQ12829 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RAB40BQ12829 AC131280.1-202ENST00000624067 4211 ntBASIC1.8□□□□□ -2.12
RAB40BQ12829 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
RAB40BQ12829 Y_RNA.1-201ENST00000352915 104 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 Y_RNA.381-201ENST00000365666 102 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 Y_RNA.399-201ENST00000383955 105 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 U3.40-201ENST00000408706 208 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 RNU2-48P-201ENST00000410694 191 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 RNA5SP489-201ENST00000410986 109 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AC027124.2-201ENST00000428249 105 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 GPM6BP3-201ENST00000442797 145 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AC073415.1-201ENST00000449240 153 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 RNU7-167P-201ENST00000459160 62 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AC108078.1-201ENST00000508073 725 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.79□□□□□ -2.12
RAB40BQ12829 RNU6-965P-201ENST00000516721 96 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AC069113.1-201ENST00000517763 267 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.79□□□□□ -2.12
RAB40BQ12829 BNIP3P16-201ENST00000589779 534 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.79□□□□□ -2.12
RAB40BQ12829 AC104073.3-201ENST00000610942 955 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.79□□□□□ -2.12
RAB40BQ12829 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RAB40BQ12829 AC063943.3-201ENST00000615562 356 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AL354950.2-201ENST00000617939 290 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 AL354685.2-201ENST00000448218 1447 ntBASIC1.79□□□□□ -2.12
RAB40BQ12829 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RAB40BQ12829 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.78□□□□□ -2.12
RAB40BQ12829 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RAB40BQ12829 RNA5SP289-201ENST00000362332 137 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 SNORD115-3-201ENST00000363100 82 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 RNU6-611P-201ENST00000384276 104 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 RNU6-692P-201ENST00000384496 107 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 Y_RNA.582-201ENST00000391023 95 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 DEFB108C-201ENST00000400154 252 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms