Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.73□□□□□ -2.13
CDH4P55283 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.73□□□□□ -2.13
CDH4P55283 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH4P55283 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH4P55283 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
CDH4P55283 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.73□□□□□ -2.13
CDH4P55283 AC090578.1-201ENST00000604955 591 ntBASIC1.73□□□□□ -2.13
CDH4P55283 RMST_7.1-201ENST00000621935 268 ntBASIC1.73□□□□□ -2.13
CDH4P55283 RNU6-527P-201ENST00000363425 104 ntBASIC1.72□□□□□ -2.13
CDH4P55283 RNY4P34-201ENST00000364779 95 ntBASIC1.72□□□□□ -2.13
CDH4P55283 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
CDH4P55283 RNA5SP190-201ENST00000365222 118 ntBASIC1.72□□□□□ -2.13
CDH4P55283 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CDH4P55283 RNU6-116P-201ENST00000384042 109 ntBASIC1.72□□□□□ -2.13
CDH4P55283 Y_RNA.576-201ENST00000384781 102 ntBASIC1.72□□□□□ -2.13
CDH4P55283 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
CDH4P55283 RNU6-195P-201ENST00000411352 109 ntBASIC1.72□□□□□ -2.13
CDH4P55283 SRIP3-201ENST00000413200 219 ntBASIC1.72□□□□□ -2.13
CDH4P55283 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH4P55283 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH4P55283 AC092447.3-201ENST00000426027 686 ntBASIC1.72□□□□□ -2.13
CDH4P55283 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH4P55283 AL591043.1-201ENST00000432461 424 ntBASIC1.72□□□□□ -2.13
CDH4P55283 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH4P55283 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH4P55283 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH4P55283 AL122001.1-201ENST00000457027 370 ntBASIC1.72□□□□□ -2.13
CDH4P55283 RPL30P1-201ENST00000488676 339 ntBASIC1.72□□□□□ -2.13
CDH4P55283 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CDH4P55283 MTND2P33-201ENST00000506452 1031 ntBASIC1.72□□□□□ -2.13
CDH4P55283 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH4P55283 Vault.3-201ENST00000516676 95 ntBASIC1.72□□□□□ -2.13
CDH4P55283 RNU6-685P-201ENST00000517088 95 ntBASIC1.72□□□□□ -2.13
CDH4P55283 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH4P55283 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH4P55283 AC073539.2-201ENST00000597113 165 ntBASIC1.72□□□□□ -2.13
CDH4P55283 AL022345.1-201ENST00000607292 135 ntBASIC1.72□□□□□ -2.13
CDH4P55283 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDH4P55283 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CDH4P55283 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CDH4P55283 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.71□□□□□ -2.14
CDH4P55283 SNORA40.3-201ENST00000390964 122 ntBASIC1.71□□□□□ -2.14
CDH4P55283 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.71□□□□□ -2.14
CDH4P55283 MTND3P17-201ENST00000416968 344 ntBASIC1.71□□□□□ -2.14
CDH4P55283 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH4P55283 AL590556.1-201ENST00000423231 483 ntBASIC1.71□□□□□ -2.14
CDH4P55283 RPS15AP10-201ENST00000432472 382 ntBASIC1.71□□□□□ -2.14
CDH4P55283 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH4P55283 AC073614.1-201ENST00000438690 650 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH4P55283 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CDH4P55283 MTND3P7-201ENST00000474435 343 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AC104806.1-201ENST00000508720 308 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH4P55283 AC018630.3-201ENST00000542637 96 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AC091135.1-201ENST00000585943 307 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AL136363.2-201ENST00000604173 851 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AC008250.2-201ENST00000615261 205 ntBASIC1.71□□□□□ -2.14
CDH4P55283 RMST_4.1-201ENST00000616886 107 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AL159153.1-201ENST00000619688 317 ntBASIC1.71□□□□□ -2.14
CDH4P55283 AC097372.5-201ENST00000623665 376 ntBASIC1.71□□□□□ -2.14
CDH4P55283 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH4P55283 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CDH4P55283 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CDH4P55283 AP000568.1-201ENST00000282964 442 ntBASIC1.7□□□□□ -2.14
CDH4P55283 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDH4P55283 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
CDH4P55283 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AL049545.1-201ENST00000401856 572 ntBASIC1.7□□□□□ -2.14
CDH4P55283 RNU6-248P-201ENST00000410720 107 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH4P55283 ISCA1P6-201ENST00000427740 390 ntBASIC1.7□□□□□ -2.14
CDH4P55283 RPS6P15-201ENST00000431996 751 ntBASIC1.7□□□□□ -2.14
CDH4P55283 IFNA20P-201ENST00000436840 528 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH4P55283 AL033528.1-201ENST00000453780 140 ntBASIC1.7□□□□□ -2.14
CDH4P55283 SNORD42A-201ENST00000459584 64 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH4P55283 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH4P55283 MTCYBP40-201ENST00000509390 1135 ntBASIC1.7□□□□□ -2.14
CDH4P55283 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH4P55283 AP003072.2-201ENST00000527756 676 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH4P55283 CBX3P4-201ENST00000538909 354 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.7□□□□□ -2.14
CDH4P55283 SEPT7P9-203ENST00000604116 343 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AP001506.1-201ENST00000615444 211 ntBASIC1.7□□□□□ -2.14
CDH4P55283 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AC138649.3-201ENST00000622154 254 ntBASIC1.7□□□□□ -2.14
CDH4P55283 AP000770.2-201ENST00000623694 100 ntBASIC1.7□□□□□ -2.14
CDH4P55283 U6.114-201ENST00000636407 96 ntBASIC1.7□□□□□ -2.14
CDH4P55283 FGF7P2-201ENST00000332473 296 ntBASIC1.69□□□□□ -2.14
CDH4P55283 RNU1-58P-201ENST00000362413 163 ntBASIC1.69□□□□□ -2.14
CDH4P55283 SNORD115-7-201ENST00000365306 82 ntBASIC1.69□□□□□ -2.14
CDH4P55283 MIR544A-201ENST00000384855 91 ntBASIC1.69□□□□□ -2.14
CDH4P55283 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CDH4P55283 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CDH4P55283 POLHP1-201ENST00000411806 470 ntBASIC1.69□□□□□ -2.14
CDH4P55283 OR6C66P-201ENST00000414917 930 ntBASIC1.69□□□□□ -2.14
CDH4P55283 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms