Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 Y_RNA.653-201ENST00000459091 95 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 RPL21P39-201ENST00000463605 483 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC027575.1-201ENST00000481064 460 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC087190.1-201ENST00000484462 480 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC093591.1-201ENST00000491435 481 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC018437.1-201ENST00000492214 406 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 RPL21P16-201ENST00000495531 483 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC005741.1-201ENST00000511094 432 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 RNU5F-8P-201ENST00000515941 111 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 RNA5SP76-201ENST00000516277 87 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 RNU6-1213P-201ENST00000517075 94 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 RN7SKP40-201ENST00000517211 242 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD12P35452 HSPE1P20-201ENST00000538133 289 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC093249.1-201ENST00000567049 203 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD12P35452 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD12P35452 AP000787.2-201ENST00000604432 568 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD12P35452 MIR1302-2-201ENST00000607096 138 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXD12P35452 PISRT1.1-201ENST00000616930 107 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 AC244517.12-201ENST00000623581 663 ntBASIC3.1□□□□□ -1.91
HOXD12P35452 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HOXD12P35452 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD12P35452 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
HOXD12P35452 Y_RNA.138-201ENST00000363462 102 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 RNU6-827P-201ENST00000365553 106 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 RNU6-898P-201ENST00000365627 104 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 RNU6-1083P-201ENST00000384022 107 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 RNU6-851P-201ENST00000384565 107 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 SNORA75.4-201ENST00000391278 119 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD12P35452 RNU6-1050P-201ENST00000410388 107 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AL030996.1-201ENST00000411430 235 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC005534.2-201ENST00000431047 433 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD12P35452 HMGN2P10-201ENST00000448085 265 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 PCMTD1P1-201ENST00000455560 355 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 BTF3P15-201ENST00000455606 336 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 RNU6-1037P-201ENST00000459571 107 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD12P35452 AC026782.1-201ENST00000512952 449 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 RNA5SP367-201ENST00000516557 118 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 Y_RNA.708-201ENST00000516950 96 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC009812.2-201ENST00000517657 457 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC107016.2-201ENST00000547968 190 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 GTF3AP2-201ENST00000557014 266 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD12P35452 ANP32BP3-201ENST00000559213 706 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC018462.2-201ENST00000605375 395 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC080078.3-201ENST00000605407 463 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC124303.1-201ENST00000605703 360 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC009229.3-201ENST00000608056 282 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AC090971.5-201ENST00000621102 293 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 AL669831.3-213ENST00000636676 183 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HOXD12P35452 AC010329.5-201ENST00000623497 2174 ntBASIC3.09□□□□□ -1.91
HOXD12P35452 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.92
HOXD12P35452 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.09□□□□□ -1.92
HOXD12P35452 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HOXD12P35452 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HOXD12P35452 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.09□□□□□ -1.92
HOXD12P35452 KPNA2P1-201ENST00000458289 1591 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD12P35452 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD12P35452 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD12P35452 Y_RNA.146-201ENST00000363549 102 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 U3.6-201ENST00000363622 211 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 RNA5SP126-201ENST00000365092 109 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 RNU5E-7P-201ENST00000365290 117 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 SET-203ENST00000372688 801 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD12P35452 RNU6-1227P-201ENST00000383981 107 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 RNU6-72P-201ENST00000384285 79 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 MIR517A-201ENST00000385001 87 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 U3.37-201ENST00000408528 213 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 Y_RNA.594-201ENST00000410373 140 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 EEF1A1P41-201ENST00000414667 207 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 AL356968.1-201ENST00000416622 474 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 USP9YP30-201ENST00000430729 455 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 AL139132.1-201ENST00000431587 344 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD12P35452 NIPA2P5-201ENST00000452282 464 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 MTCO3P10-201ENST00000455912 772 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD12P35452 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD12P35452 AC091826.1-201ENST00000514065 313 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 Y_RNA.670-201ENST00000516255 105 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD12P35452 TRAV32-201ENST00000553993 340 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD12P35452 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD12P35452 AP000654.2-201ENST00000605633 586 ntBASIC3.08□□□□□ -1.92
HOXD12P35452 AL359198.2-201ENST00000611836 194 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms