Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SNORD98-201ENST00000636377 67 ntBASIC2.17□□□□□ -2.06
CTNNA1P35221 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CTNNA1P35221 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
CTNNA1P35221 RNU1-58P-201ENST00000362413 163 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 RNU6-1164P-201ENST00000364428 107 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CTNNA1P35221 SNORA16.2-201ENST00000390991 127 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 AF228730.1-201ENST00000397972 663 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 RNU4-53P-201ENST00000410828 140 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.16□□□□□ -2.06
CTNNA1P35221 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.16□□□□□ -2.06
CTNNA1P35221 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.16□□□□□ -2.06
CTNNA1P35221 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.16□□□□□ -2.06
CTNNA1P35221 BET1P1-201ENST00000482276 359 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 AC022447.4-201ENST00000504053 364 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 ANXA2P1-201ENST00000505539 926 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.16□□□□□ -2.06
CTNNA1P35221 MTND3P5-201ENST00000512798 333 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 TRAV32-201ENST00000553993 340 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.16□□□□□ -2.06
CTNNA1P35221 AL391840.1-201ENST00000571144 367 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 MIR3935-201ENST00000583472 104 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 RSL24D1P11-201ENST00000591045 491 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 BNIP3P25-201ENST00000596023 559 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 CYP2C61P-201ENST00000604072 290 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 AC008536.2-201ENST00000607284 349 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 AL022345.1-201ENST00000607292 135 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CTNNA1P35221 AC073114.1-201ENST00000612027 490 ntBASIC2.16□□□□□ -2.06
CTNNA1P35221 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CTNNA1P35221 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CTNNA1P35221 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CTNNA1P35221 RNU6-428P-201ENST00000362942 107 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 XGY1-201ENST00000381172 446 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 RNU6-692P-201ENST00000384496 107 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 MIR1294-201ENST00000408503 142 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 RNU2-29P-201ENST00000410423 189 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.15□□□□□ -2.07
CTNNA1P35221 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 MTATP6P17-201ENST00000431030 672 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AL451074.3-201ENST00000437709 472 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.15□□□□□ -2.07
CTNNA1P35221 AL031274.1-201ENST00000450334 232 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.15□□□□□ -2.07
CTNNA1P35221 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.15□□□□□ -2.07
CTNNA1P35221 AC022880.1-201ENST00000534017 973 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 MIR3136-201ENST00000583498 78 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AC008752.3-201ENST00000588113 712 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AC002044.1-201ENST00000606707 158 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AC098657.3-201ENST00000620434 263 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 DUXAP9-208ENST00000622815 614 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.15□□□□□ -2.07
CTNNA1P35221 AP000560.1-201ENST00000624150 1937 ntBASIC2.15□□□□□ -2.07
CTNNA1P35221 RNU6-1141P-201ENST00000364520 107 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 RNU6-43P-201ENST00000384302 107 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AL357139.1-201ENST00000407792 426 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CTNNA1P35221 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA1P35221 AL117339.3-201ENST00000418733 162 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AC090960.1-201ENST00000421072 306 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 MTCO2P11-201ENST00000431069 680 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.14□□□□□ -2.07
CTNNA1P35221 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA1P35221 SCARNA18-201ENST00000459004 134 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AC145146.1-201ENST00000496370 254 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 SNORA25.17-201ENST00000517184 124 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA1P35221 OR11H5P-201ENST00000554039 926 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 MTND3P12-201ENST00000559068 328 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.14□□□□□ -2.07
CTNNA1P35221 Z99497.2-201ENST00000603634 310 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AC025449.1-201ENST00000603896 529 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AC025811.1-201ENST00000604312 472 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 APOOP1-201ENST00000604695 592 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA1P35221 U1.36-201ENST00000620684 176 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA1P35221 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.14□□□□□ -2.07
CTNNA1P35221 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CTNNA1P35221 MIR3974-201ENST00000637126 96 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 AC241585.2-209ENST00000638217 143 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 ZNF680P1-201ENST00000436625 1469 ntBASIC2.14□□□□□ -2.07
CTNNA1P35221 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CTNNA1P35221 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CTNNA1P35221 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CTNNA1P35221 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CTNNA1P35221 RNU6-266P-201ENST00000364225 107 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CTNNA1P35221 RNA5SP212-201ENST00000391223 107 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA1P35221 EIF4EP2-201ENST00000422816 654 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA1P35221 UBE2V1P4-201ENST00000425374 344 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA1P35221 MTND4P32-201ENST00000437189 1237 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms