Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC12P31275 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC12P31275 AL161912.2-201ENST00000565707 3007 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC12P31275 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC12P31275 Y_RNA.60-201ENST00000362831 98 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 snoU2_19.2-201ENST00000363024 80 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 RNU6-1285P-201ENST00000363480 105 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
HOXC12P31275 RNU6-937P-201ENST00000384325 106 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC12P31275 AL590135.1-201ENST00000422215 156 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 AC019205.3-201ENST00000424573 156 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 YME1L1P1-201ENST00000429435 297 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 AL445305.1-201ENST00000432577 575 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC12P31275 MTND4LP30-201ENST00000454092 297 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 AC026726.1-201ENST00000512859 601 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 Y_RNA.673-201ENST00000516306 88 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 RNU5B-3P-201ENST00000516601 115 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 SNORD19.2-201ENST00000516978 73 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 RNU6-58P-201ENST00000517143 103 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC12P31275 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC12P31275 AC105137.2-201ENST00000569073 466 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 AL161756.2-201ENST00000604597 246 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC12P31275 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 MAPK10-373ENST00000641983 6772 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HOXC12P31275 TNPO1P3-201ENST00000436471 2662 ntBASIC3.64□□□□□ -1.83
HOXC12P31275 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC12P31275 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC12P31275 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC12P31275 RNA5SP361-201ENST00000362686 118 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 SNORD35B-201ENST00000363660 87 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 Y_RNA.562-201ENST00000384695 113 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 MIR7-3-201ENST00000384898 110 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 MIR10B-201ENST00000385011 110 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 RNA5SP213-201ENST00000391031 106 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 RNA5SP252-201ENST00000391131 119 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 EI24P2-201ENST00000397776 1076 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 SNORD12B-201ENST00000410433 91 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 RN7SKP167-201ENST00000411047 285 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC12P31275 AC138623.1-201ENST00000418060 216 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 AC012306.1-201ENST00000423267 114 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 AL445584.1-201ENST00000431451 330 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 AC096638.1-201ENST00000444678 216 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 AL441985.1-201ENST00000457727 251 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 RNU6-1023P-201ENST00000516137 106 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXC12P31275 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXC12P31275 AC120057.2-201ENST00000571520 271 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
HOXC12P31275 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
HOXC12P31275 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC12P31275 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC12P31275 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC12P31275 UBE3AP2-201ENST00000429033 2259 ntBASIC3.63□□□□□ -1.83
HOXC12P31275 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
HOXC12P31275 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC12P31275 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
HOXC12P31275 AC010889.1-201ENST00000566193 2666 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AC002543.1-201ENST00000299783 1954 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AL079305.1-201ENST00000623159 3008 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
HOXC12P31275 AL391987.6-201ENST00000305671 199 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 RNU6-281P-201ENST00000384212 103 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 RNU6-748P-201ENST00000384648 107 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 RNU6-159P-201ENST00000391080 106 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 RNU1-101P-201ENST00000391171 127 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC12P31275 HLFP1-201ENST00000402375 499 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 SNORA11.2-201ENST00000408318 127 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 Y_RNA.602-201ENST00000410535 92 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AL358075.3-201ENST00000426289 226 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AL591419.1-201ENST00000427423 339 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AC090525.1-201ENST00000479116 478 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 SNORA31.16-201ENST00000516773 139 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 SNORD59.2-201ENST00000516873 68 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 RNU6-711P-201ENST00000517255 106 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC12P31275 DEFB108E-201ENST00000524692 240 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AC115990.1-201ENST00000526957 301 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC12P31275 AC025627.2-201ENST00000576220 160 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 MIR5685-201ENST00000579080 79 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AC073657.2-201ENST00000605661 303 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 AP001282.2-201ENST00000616149 309 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC12P31275 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 SNORA50A-202ENST00000629536 136 ntBASIC3.62□□□□□ -1.83
HOXC12P31275 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HOXC12P31275 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms