Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC073544.1-201ENST00000600110 1595 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.6□□□□□ -1.83
CNGA1P29973 Y_RNA.473-201ENST00000384333 102 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 MIR544A-201ENST00000384855 91 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 SNORA48.8-201ENST00000391324 134 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 RNU6-174P-201ENST00000410406 106 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 RNU6-1140P-201ENST00000410517 106 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 MTCO2P27-201ENST00000420740 428 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 AF228730.4-201ENST00000421457 183 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 NUP35P1-201ENST00000422734 947 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 RPL23AP95-201ENST00000426806 265 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.6□□□□□ -1.83
CNGA1P29973 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.6□□□□□ -1.83
CNGA1P29973 RNU7-152P-201ENST00000458982 64 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 AC008571.1-201ENST00000467232 300 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 SMURF2P1-201ENST00000514992 481 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.6□□□□□ -1.83
CNGA1P29973 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.6□□□□□ -1.83
CNGA1P29973 GLYCAM1-201ENST00000546596 285 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 AC109446.1-201ENST00000566172 220 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 MIR2682-201ENST00000580305 110 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 MIR5690-201ENST00000583739 73 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 AC000403.1-201ENST00000613696 3585 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CNGA1P29973 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.59□□□□□ -1.83
CNGA1P29973 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CNGA1P29973 RNU6-1010P-201ENST00000362757 107 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 RNU6-1083P-201ENST00000384022 107 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 BTF3L4P2-201ENST00000392798 346 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 AL591034.2-201ENST00000402839 359 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 RN7SKP284-201ENST00000411002 343 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.59□□□□□ -1.83
CNGA1P29973 Z82205.1-201ENST00000428456 297 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 AC009969.1-201ENST00000438726 172 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.59□□□□□ -1.83
CNGA1P29973 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.59□□□□□ -1.83
CNGA1P29973 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CNGA1P29973 SEM1P1-201ENST00000506694 209 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.59□□□□□ -1.83
CNGA1P29973 RN7SKP272-201ENST00000516988 232 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 RNU6-1213P-201ENST00000517075 94 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.59□□□□□ -1.83
CNGA1P29973 AL627309.6-201ENST00000606857 840 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 AC096772.1-201ENST00000609146 564 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 PISRT1.1-201ENST00000616930 107 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 AC126177.8-201ENST00000618339 1015 ntBASIC3.59□□□□□ -1.83
CNGA1P29973 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.59□□□□□ -1.84
CNGA1P29973 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CNGA1P29973 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CNGA1P29973 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.58□□□□□ -1.84
CNGA1P29973 Y_RNA.404-201ENST00000383978 102 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 SNORA7.4-201ENST00000384249 137 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 RNU6-43P-201ENST00000384302 107 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 RNU6-1222P-201ENST00000384615 107 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 RNU6-310P-201ENST00000384655 107 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 RNU6-1304P-201ENST00000411374 106 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 RPS20P15-201ENST00000412792 311 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 EEF1A1P41-201ENST00000414667 207 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.58□□□□□ -1.84
CNGA1P29973 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.58□□□□□ -1.84
CNGA1P29973 RPL7P42-201ENST00000481005 679 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.58□□□□□ -1.84
CNGA1P29973 MTCO3P13-201ENST00000577757 781 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.58□□□□□ -1.84
CNGA1P29973 AL133255.1-201ENST00000606374 441 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CNGA1P29973 AC002543.1-201ENST00000299783 1954 ntBASIC3.58□□□□□ -1.84
CNGA1P29973 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNGA1P29973 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CNGA1P29973 RNU6-1141P-201ENST00000364520 107 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CNGA1P29973 Y_RNA.431-201ENST00000384086 102 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 Y_RNA.460-201ENST00000384255 102 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 RNU6-784P-201ENST00000384330 106 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 RNU2-23P-201ENST00000410545 195 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 RNA5SP229-201ENST00000410809 99 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 EIF4EP2-201ENST00000422816 654 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 UBE2V1P7-201ENST00000446395 340 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 RPL39P29-201ENST00000447779 157 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.57□□□□□ -1.84
CNGA1P29973 ELOCP24-201ENST00000456370 334 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.57□□□□□ -1.84
CNGA1P29973 Y_RNA.653-201ENST00000459091 95 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 RPL30P12-201ENST00000474666 353 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.57□□□□□ -1.84
CNGA1P29973 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.57□□□□□ -1.84
CNGA1P29973 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.57□□□□□ -1.84
CNGA1P29973 AC079598.5-201ENST00000547460 117 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 GTF3AP2-201ENST00000557014 266 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.57□□□□□ -1.84
CNGA1P29973 AL359854.1-201ENST00000614203 1594 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 AL159153.1-201ENST00000619688 317 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.57□□□□□ -1.84
CNGA1P29973 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.57□□□□□ -1.84
CNGA1P29973 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNGA1P29973 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
CNGA1P29973 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CNGA1P29973 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNGA1P29973 SNORD114-19-201ENST00000363072 75 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 SNORD15B-201ENST00000384714 146 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms