Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.68□□□□□ -1.82
VAMP1P23763 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VAMP1P23763 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAMP1P23763 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
VAMP1P23763 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP1P23763 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP1P23763 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VAMP1P23763 Z82209.1-201ENST00000422141 2135 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP1P23763 RNU6-1305P-201ENST00000364353 104 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 RNU6-1310P-201ENST00000384153 107 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 Y_RNA.452-201ENST00000384202 108 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 RNU6-937P-201ENST00000384325 106 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 RNU6-220P-201ENST00000390919 107 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 U3.39-201ENST00000408569 239 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 OR3A2-201ENST00000408891 1076 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AC104332.2-201ENST00000429959 156 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AL445687.1-201ENST00000439946 251 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AC112498.1-201ENST00000444401 332 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AC073850.1-201ENST00000449243 255 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 EEF1B2P7-201ENST00000451177 676 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AC117440.1-201ENST00000474107 571 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.67□□□□□ -1.82
VAMP1P23763 RNU6-570P-201ENST00000517051 105 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 RNU6-1231P-201ENST00000517185 103 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
VAMP1P23763 MIR4753-201ENST00000585119 83 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AC073657.2-201ENST00000605661 303 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 AC011373.1-201ENST00000607270 237 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
VAMP1P23763 MIR8062-201ENST00000621515 85 ntBASIC3.67□□□□□ -1.82
VAMP1P23763 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP1P23763 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP1P23763 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP1P23763 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP1P23763 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.67□□□□□ -1.82
VAMP1P23763 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAMP1P23763 RNU6-626P-201ENST00000363354 107 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 RNU6-743P-201ENST00000364151 106 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 RNU6-234P-201ENST00000365229 104 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 Y_RNA.415-201ENST00000384012 112 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 U8.12-201ENST00000384701 133 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 MIR568-201ENST00000385036 95 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 Y_RNA.602-201ENST00000410535 92 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.66□□□□□ -1.82
VAMP1P23763 LINC01399-202ENST00000458450 244 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 AC114982.1-201ENST00000469402 321 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 AC072052.1-201ENST00000496556 306 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.66□□□□□ -1.82
VAMP1P23763 AC025554.1-201ENST00000505641 188 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 RNU6-1098P-201ENST00000516772 96 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.66□□□□□ -1.82
VAMP1P23763 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.66□□□□□ -1.82
VAMP1P23763 AC068205.3-201ENST00000636385 468 ntBASIC3.66□□□□□ -1.82
VAMP1P23763 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VAMP1P23763 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
VAMP1P23763 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.66□□□□□ -1.82
VAMP1P23763 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VAMP1P23763 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.65□□□□□ -1.82
VAMP1P23763 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
VAMP1P23763 CPHL1P-201ENST00000461341 3407 ntBASIC3.65□□□□□ -1.82
VAMP1P23763 RNA5SP322-201ENST00000363617 119 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 Y_RNA.288-201ENST00000364854 92 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 RNU6-20P-201ENST00000384106 107 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 MIR561-201ENST00000385216 97 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 MIR143-201ENST00000385300 106 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 AL390729.2-201ENST00000416137 156 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 SCARNA22-201ENST00000503991 125 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 RN7SKP66-201ENST00000516681 231 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 RN7SKP282-201ENST00000516824 299 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 RN7SKP147-201ENST00000517154 244 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.65□□□□□ -1.83
VAMP1P23763 TGIF1P1-201ENST00000558095 802 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 AC233702.2-202ENST00000562547 291 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 MYL12BP1-201ENST00000569826 507 ntBASIC3.65□□□□□ -1.83
VAMP1P23763 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.65□□□□□ -1.83
VAMP1P23763 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VAMP1P23763 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VAMP1P23763 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.65□□□□□ -1.83
VAMP1P23763 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAMP1P23763 MIR323A-201ENST00000362199 86 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 RNA5SP124-201ENST00000362739 110 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 Y_RNA.222-201ENST00000364264 102 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 SNORD87-201ENST00000364849 89 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 RNU6-806P-201ENST00000365147 105 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 RN7SKP269-201ENST00000365545 319 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AL357075.1-201ENST00000404107 726 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AL357139.1-201ENST00000407792 426 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.64□□□□□ -1.83
VAMP1P23763 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.64□□□□□ -1.83
VAMP1P23763 AC245028.1-201ENST00000423259 256 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AL132765.1-201ENST00000434165 553 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AC005002.2-201ENST00000438228 269 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.64□□□□□ -1.83
VAMP1P23763 UBBP3-201ENST00000445497 241 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AC144530.1-201ENST00000452862 555 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AC010618.1-201ENST00000469924 477 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 DEFB131C-201ENST00000528817 165 ntBASIC3.64□□□□□ -1.83
VAMP1P23763 AC105129.1-201ENST00000560250 297 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms