Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SNORA53-201ENST00000391141 249 ntBASIC4.59□□□□□ -1.67
RFX1P22670 RNU4-30P-201ENST00000410245 143 ntBASIC4.59□□□□□ -1.67
RFX1P22670 Y_RNA.595-201ENST00000410403 105 ntBASIC4.59□□□□□ -1.67
RFX1P22670 AL157831.1-201ENST00000426134 473 ntBASIC4.59□□□□□ -1.67
RFX1P22670 RPL23AP52-201ENST00000439311 478 ntBASIC4.59□□□□□ -1.67
RFX1P22670 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX1P22670 AC006517.1-201ENST00000480485 328 ntBASIC4.59□□□□□ -1.67
RFX1P22670 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX1P22670 RNU5F-2P-201ENST00000516066 82 ntBASIC4.59□□□□□ -1.67
RFX1P22670 SNORA31.21-201ENST00000517180 77 ntBASIC4.59□□□□□ -1.67
RFX1P22670 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX1P22670 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX1P22670 FAM27D1-201ENST00000612308 341 ntBASIC4.59□□□□□ -1.67
RFX1P22670 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX1P22670 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.59□□□□□ -1.68
RFX1P22670 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFX1P22670 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.58□□□□□ -1.68
RFX1P22670 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFX1P22670 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RFX1P22670 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RFX1P22670 MIR372-201ENST00000362225 67 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RNU6-873P-201ENST00000363833 107 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RNU6-961P-201ENST00000363893 105 ntBASIC4.58□□□□□ -1.68
RFX1P22670 SNORD46.1-201ENST00000364139 104 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RNU1-132P-201ENST00000364300 164 ntBASIC4.58□□□□□ -1.68
RFX1P22670 Y_RNA.297-201ENST00000364950 91 ntBASIC4.58□□□□□ -1.68
RFX1P22670 Y_RNA.570-201ENST00000384750 101 ntBASIC4.58□□□□□ -1.68
RFX1P22670 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFX1P22670 U3.26-201ENST00000391236 204 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RNU6-1077P-201ENST00000410506 102 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RNA5SP104-201ENST00000410989 118 ntBASIC4.58□□□□□ -1.68
RFX1P22670 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.58□□□□□ -1.68
RFX1P22670 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFX1P22670 PRELID3BP1-201ENST00000457142 540 ntBASIC4.58□□□□□ -1.68
RFX1P22670 AC117440.1-201ENST00000474107 571 ntBASIC4.58□□□□□ -1.68
RFX1P22670 AC074133.1-201ENST00000515696 183 ntBASIC4.58□□□□□ -1.68
RFX1P22670 SNORA40.9-201ENST00000515895 93 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RNU7-110P-201ENST00000516891 62 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RNU2-31P-201ENST00000516954 155 ntBASIC4.58□□□□□ -1.68
RFX1P22670 RN7SKP40-201ENST00000517211 242 ntBASIC4.58□□□□□ -1.68
RFX1P22670 AC233702.2-202ENST00000562547 291 ntBASIC4.58□□□□□ -1.68
RFX1P22670 MIR3923-201ENST00000579521 83 ntBASIC4.58□□□□□ -1.68
RFX1P22670 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX1P22670 AC012531.5-201ENST00000611375 151 ntBASIC4.58□□□□□ -1.68
RFX1P22670 MIR6875-201ENST00000617506 72 ntBASIC4.58□□□□□ -1.68
RFX1P22670 MIR8059-201ENST00000620427 81 ntBASIC4.58□□□□□ -1.68
RFX1P22670 AL109809.4-201ENST00000603520 2185 ntBASIC4.58□□□□□ -1.68
RFX1P22670 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX1P22670 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
RFX1P22670 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX1P22670 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.58□□□□□ -1.68
RFX1P22670 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
RFX1P22670 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
RFX1P22670 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX1P22670 SNORD114-19-201ENST00000363072 75 ntBASIC4.57□□□□□ -1.68
RFX1P22670 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
RFX1P22670 RNU6-21P-201ENST00000384710 107 ntBASIC4.57□□□□□ -1.68
RFX1P22670 RNU2-49P-201ENST00000410666 184 ntBASIC4.57□□□□□ -1.68
RFX1P22670 RPL23AP83-201ENST00000434984 473 ntBASIC4.57□□□□□ -1.68
RFX1P22670 AC010095.1-201ENST00000443543 144 ntBASIC4.57□□□□□ -1.68
RFX1P22670 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX1P22670 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
RFX1P22670 Y_RNA.683-201ENST00000516508 93 ntBASIC4.57□□□□□ -1.68
RFX1P22670 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX1P22670 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RFX1P22670 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RFX1P22670 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
RFX1P22670 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX1P22670 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RFX1P22670 Y_RNA.44-201ENST00000362676 108 ntBASIC4.56□□□□□ -1.68
RFX1P22670 RNU1-14P-201ENST00000362759 152 ntBASIC4.56□□□□□ -1.68
RFX1P22670 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX1P22670 Y_RNA.555-201ENST00000384673 110 ntBASIC4.56□□□□□ -1.68
RFX1P22670 Y_RNA.569-201ENST00000384749 103 ntBASIC4.56□□□□□ -1.68
RFX1P22670 MIR93-201ENST00000385024 80 ntBASIC4.56□□□□□ -1.68
RFX1P22670 MIR320B2-201ENST00000408479 138 ntBASIC4.56□□□□□ -1.68
RFX1P22670 MIR1298-201ENST00000408783 112 ntBASIC4.56□□□□□ -1.68
RFX1P22670 RNU6-1140P-201ENST00000410517 106 ntBASIC4.56□□□□□ -1.68
RFX1P22670 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX1P22670 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX1P22670 AL138752.1-201ENST00000452964 351 ntBASIC4.56□□□□□ -1.68
RFX1P22670 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.56□□□□□ -1.68
RFX1P22670 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.56□□□□□ -1.68
RFX1P22670 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.56□□□□□ -1.68
RFX1P22670 GNRHR2P1-201ENST00000555315 631 ntBASIC4.56□□□□□ -1.68
RFX1P22670 AC004792.1-201ENST00000614523 137 ntBASIC4.56□□□□□ -1.68
RFX1P22670 FTX_2.1-201ENST00000618816 94 ntBASIC4.56□□□□□ -1.68
RFX1P22670 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.56□□□□□ -1.68
RFX1P22670 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX1P22670 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX1P22670 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX1P22670 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFX1P22670 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX1P22670 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX1P22670 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX1P22670 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX1P22670 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RFX1P22670 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFX1P22670 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX1P22670 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms