Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT4O95628 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT4O95628 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.53□□□□□ -1.84
CNOT4O95628 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT4O95628 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT4O95628 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT4O95628 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CNOT4O95628 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.52□□□□□ -1.85
CNOT4O95628 MAPK10-362ENST00000641864 4484 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.52□□□□□ -1.85
CNOT4O95628 AC233981.2-201ENST00000611524 1614 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT4O95628 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.52□□□□□ -1.85
CNOT4O95628 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CNOT4O95628 RNU6-1301P-201ENST00000362724 104 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 Y_RNA.83-201ENST00000363005 113 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 RNU1-105P-201ENST00000363470 161 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 RNU6-746P-201ENST00000384112 109 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CNOT4O95628 Z98941.1-201ENST00000407764 100 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 RNU2-20P-201ENST00000410425 191 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 RNA5SP306-201ENST00000411087 107 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 Y_RNA.793-201ENST00000411222 111 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.52□□□□□ -1.85
CNOT4O95628 TRIAP1P1-201ENST00000427062 225 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 Z82188.1-201ENST00000436709 154 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 AC124916.1-201ENST00000444020 547 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 RPL26P9-201ENST00000457466 433 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.52□□□□□ -1.85
CNOT4O95628 RPS26P15-201ENST00000488067 348 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 IGKV2-38-201ENST00000517443 247 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 AC023824.2-201ENST00000566185 400 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 AC091903.1-201ENST00000624322 454 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.52□□□□□ -1.85
CNOT4O95628 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.52□□□□□ -1.85
CNOT4O95628 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT4O95628 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT4O95628 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.52□□□□□ -1.85
CNOT4O95628 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT4O95628 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT4O95628 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT4O95628 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT4O95628 AC007496.3-201ENST00000624987 3443 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
CNOT4O95628 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CNOT4O95628 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.51□□□□□ -1.85
CNOT4O95628 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNOT4O95628 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CNOT4O95628 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CNOT4O95628 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CNOT4O95628 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNOT4O95628 RNU6-105P-201ENST00000363909 104 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 RNU6-937P-201ENST00000384325 106 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CNOT4O95628 PCNPP3-201ENST00000393579 471 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.51□□□□□ -1.85
CNOT4O95628 MIR888-201ENST00000401186 77 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.51□□□□□ -1.85
CNOT4O95628 Y_RNA.644-201ENST00000459006 113 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 RNU7-23P-201ENST00000459465 62 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 RPS26P21-201ENST00000475397 348 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 AC025554.1-201ENST00000505641 188 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.51□□□□□ -1.85
CNOT4O95628 SERF1AP1-201ENST00000514575 187 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 RNU6-496P-201ENST00000516145 99 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 Y_RNA.674-201ENST00000516362 113 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 YPEL5P3-201ENST00000547227 352 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 MIR4659A-201ENST00000580269 81 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.51□□□□□ -1.85
CNOT4O95628 AC107294.3-201ENST00000609211 526 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 AC127459.3-201ENST00000624328 466 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 SCARNA4-201ENST00000629045 128 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNOT4O95628 AC009541.1-201ENST00000438279 2662 ntBASIC3.51□□□□□ -1.85
CNOT4O95628 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.51□□□□□ -1.85
CNOT4O95628 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNOT4O95628 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CNOT4O95628 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNOT4O95628 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNOT4O95628 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.5□□□□□ -1.85
CNOT4O95628 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.5□□□□□ -1.85
CNOT4O95628 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.5□□□□□ -1.85
CNOT4O95628 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNOT4O95628 RNU6-222P-201ENST00000362438 107 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 RNU6-774P-201ENST00000363238 107 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 RNA5SP97-201ENST00000365006 84 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 RNU6-290P-201ENST00000365212 101 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 RNU6-213P-201ENST00000384051 104 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 RNU6-102P-201ENST00000384485 104 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.5□□□□□ -1.85
CNOT4O95628 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.5□□□□□ -1.85
CNOT4O95628 AC083863.1-201ENST00000438811 231 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 PRSS3P4-201ENST00000453323 162 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 RNA5SP164-201ENST00000516533 110 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 RN7SKP272-201ENST00000516988 232 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 CYCSP30-201ENST00000546447 172 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 MIR4782-201ENST00000577987 79 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 AC010928.2-201ENST00000588017 287 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms